Phragmites australis (common reed): 133906215
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Entry
133906215 CDS
T10575
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133906215
Spliceosome [BR:
paua03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133906215
Other components
Complex C specific factors
133906215
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
133906215
NCBI-ProteinID:
XP_062204022
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Position
23:21931970..21934979
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AA seq
840 aa
AA seq
DB search
MEEDAEGMDRFDMDGDFEGGRFGRDGEFYYKARRERAPQTRDDAIYGVFAEGDSDYDSDD
DEGSRRRGRRKRRRDGAEPDLTKPVQFVSTGKFMPTQEPEPEQRPGLGSASSAKEEEAEE
EEQDEEEDTEMLPSMFGKIKEGARARREEKERERVAAERRRQVAGVGAGAPAAAPGSLQA
NSKVAKMMEMMGYKKGMGLGKNEQGMVTPLQSTLRPKNAGLGSVEGFKEPKPMVAKENLP
APPPPPASAKKEQRPWSKKASARKAPVLTKNELLAMRAEQEQDKQPVVVQKVIDMRGPQA
RVLTDLKGLNIEQEMEANDVPMPELQYNVRLLVDEAKADIVRLDGQLRREQEKVASLVRE
KEKVSKQETLQKRQLQVMERIAETLDQVRMDETAGMLTLDGLLQTFQGLKVRFEEEFKMC
SIAWIACRFAHPLLIRVFQGWQPLQDPKFGLDVMKKWKHLLQGDQPYDFSDGAASMGPYV
QLVSEVILPAVRISGTNSWEARVPEPMLCFLELWDKEQLLPPIVLQSILEHVIMPKLSAA
VDSWDPRRENVPIHVWVHPWLPMLRERIETLCHSIRYKLSSVLHVWQAHDSSAYAVLSPW
KDVFDSASWEDLIVRYIIPKLRLALQEFQINPANQKLDQFNWVMMWASAIPVHHMVHILE
IDLFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMMNQA
AEGLEVVQPGARENVGYLRATEKRQFDAAQQAYHAVPGAAMADLSFKESIQAYAMEQGLL
FMPRVGKFYNGMPVYEFGTVSVCIDSVKRLLYAQLQEGIERWSAVTLTQLMEMNRMGRPR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggaggggatggaccggttcgacatggacggggatttcgagggtggg
aggttcggccgcgatggggagttctactacaaggcccgccgggagcgcgcgccgcagacc
cgggacgacgccatctacggggtgttcgcagagggcgactccgactacgattccgatgac
gacgaagggtcccgccgccgcggccgtcgaaagcgccgcagggacggcgccgaaccggac
ctcaccaagcccgtccagttcgtctccaccggcaagttcatgcccacccaggagcccgag
cccgagcagaggccgggactcgggagcgcgtcttccgccaaggaggaggaggcggaggaa
gaggagcaggacgaggaggaggacaccgagatgctgccgtcgatgttcgggaagatcaag
gagggcgcccgcgcgaggcgggaggagaaggagcgggagcgcgtcgccgccgagcgccgc
cgccaggtagcaggggtgggggcgggggcgccggcagcggccccggggagcctgcaggcc
aactccaaggtggccaagatgatggagatgatggggtacaagaagggcatgggcctcggc
aagaacgagcaggggatggtcacgccgctgcagagcaccttgcgccctaagaacgccggc
cttggcagtgtcgagggttttaaggagcccaagcccatggtggctaaggagaacctgccg
gccccaccacctccaccggcgtctgccaagaaagagcagcggccatggtcaaagaaggcc
agcgcgaggaaagctccggtcttgacgaagaatgagctgctggccatgcgtgccgagcag
gagcaggacaagcagcctgtggttgtgcagaaggtgattgacatgcgagggccgcaggcg
cgtgtgctgacagacttgaaggggctcaatattgaacaggagatggaggctaatgacgta
ccgatgccagagctgcagtacaacgtgcggctgcttgttgatgaggctaaggctgatatt
gtgaggttggacgggcagctacggcgggagcaggagaaggtggctagcttggtgcgggag
aaggagaaagtgtcgaagcaggagacgttgcagaaacgccagctgcaggtgatggagagg
attgcagagacactagaccaggtccgcatggatgagacagctggcatgctcactctggat
gggttgcttcagacattccagggcttgaaggtgcgctttgaggaggagttcaagatgtgt
agcattgcatggattgcttgccgatttgcgcatccactgctaatccgggtcttccagggg
tggcagcctctgcaggatccgaagtttgggttggatgtcatgaaaaagtggaagcacttg
ctgcagggggaccaaccctatgacttctccgatggggctgcatcaatggggccatatgtg
cagcttgttagtgaggtcatccttccagctgtgaggatatccggaaccaattcatgggag
gcaagggttccagaaccaatgctctgctttcttgagttatgggataaggagcagttgctg
cctcctattgtgcttcaatcaatactagagcatgtgatcatgccaaagctctcagctgcc
gtggattcttgggacccacgcagggagaatgtaccaatacatgtgtgggtacacccatgg
ttgccgatgctaagggaaaggatagagaccttgtgccattctattcggtacaagctgagc
agtgtactccacgtatggcaagcacatgattcatcagcttatgctgtgttgtctccatgg
aaggatgtgtttgattctgcgagctgggaagacctgattgtgcgttatatcattcctaaa
ctgagattggcactgcaagagttccagatcaacccagcaaaccagaagctggatcagttc
aactgggtgatgatgtgggcatctgcaataccagtacaccatatggttcacatattggaa
attgatttgttcagcaagtggcagcaggtcctataccattggttgtgctcaccaaatcct
gatttcaatgagataatgaactggtataagggctggaagggcctttttccacctgagttg
ctcgccaatgagcgcatacggatgcttctaaccgctggtcttgacatgatgaaccaagct
gcggaaggactagaggtggtgcagcctggggctagggagaatgtgggctacttgagagca
actgagaagcggcagtttgatgcagcacagcaagcttaccatgctgtgccaggggcagcc
atggcagatttgagtttcaaggagtctatccaggcatatgcaatggagcaaggtctgctg
tttatgcctagagttggtaagttctacaatggcatgccggtgtatgagtttggcactgta
agtgtttgcatagactctgtgaagcgactactgtatgcacaacttcaagagggaattgag
agatggagtgctgtaactcttactcagttgatggaaatgaatcggatggggagaccacgc
tag
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