KEGG   Phragmites australis (common reed): 133906296
Entry
133906296         CDS       T10575                                 
Name
(RefSeq) serine hydroxymethyltransferase 4-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
paua  Phragmites australis (common reed)
Pathway
paua00260  Glycine, serine and threonine metabolism
paua00460  Cyanoamino acid metabolism
paua00630  Glyoxylate and dicarboxylate metabolism
paua00670  One carbon pool by folate
paua01100  Metabolic pathways
paua01110  Biosynthesis of secondary metabolites
paua01200  Carbon metabolism
paua01230  Biosynthesis of amino acids
paua01240  Biosynthesis of cofactors
paua04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:paua00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    133906296
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    133906296
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    133906296
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    133906296
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    133906296
Enzymes [BR:paua01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     133906296
SSDB
Motif
Pfam: SHMT BRCA2
Other DBs
NCBI-GeneID: 133906296
NCBI-ProteinID: XP_062204144
LinkDB
Position
23:complement(10977274..10983277)
AA seq 547 aa
MAAMAPHRLSQPPARAALCSHPTAATRALTKHPSTTSSPLRFPLLRSAAAAATRPVRLSA
AAAISTAIPTTAAAAAMDAVAEWGLTPLSEADPEVYDLIEREKRRQRAGIELIASENFTS
LAVMEALGSPLTNKYSEGMPGARYYGGNEVIDEVEDVCRGRALAAFHLDPAAWGVNVQPY
SGSPANFAAYTGLLEPHDRIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSD
TGYVDYGRLEEKAMDFRPKLIICGGSAYPRDWDYARLRAIADKCGAMLLCDMAHISGLVA
AQEASNPFEYSDVVTTTTHKSLRGPRSGMIFYRKGLKPPKKGQPEGALYDYEDKINFAVF
PSLQGGPHNHQIAALAVALKQAMSPGFKAYIQQVKANAVALGNHLMSKGYKLVTDGTENH
LVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALSPGGVRIGTPAMTSRGLVEED
FVQVAEYLHHAVTICLNVQDKHGKLLKNFDKGLVNNKDIGNLKVEVEKFATSFEMPGFRV
SDMKYKD
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggccgccatggccccgcaccgcctttcccagccaccggcgcgcgccgccctttgctcc
caccccaccgctgccaccagggctctcactaagcatccgtccaccacctcctcccctctc
cgctttccactcctccgctccgccgcagctgcagcaacccggcccgtccgcctctccgct
gccgctgcgatttccacggccatccccaccaccgccgccgccgccgcgatggacgccgtg
gcggagtgggggctcactcccctgtccgaggcggacccggaggtgtacgacctcatcgag
cgcgaaaagcggcggcagcgcgcgggcatcgagctcatcgcctccgagaacttcacctcg
ctcgccgtcatggaggcgctcggctccccgctcaccaacaagtactcggagggcatgccg
ggggcgcgctactacggcggcaacgaggtcatcgacgaggtcgaggacgtctgccgcggg
cgcgctctcgccgcgttccacctcgaccccgcggcatggggcgtcaacgtgcagccgtac
tcgggctcgccggcgaactttgcggcctacaccggcctgctcgagccccacgacaggatc
atggggctcgacctgccgtccgggggacacctcacccacgggtactacacggcgggcggc
aagaagatctccgccacgtccatctacttcgagagcctgccgtacaaggtgagctccgac
accgggtacgtcgactacggcaggctggaggagaaggcaatggatttccgccccaagctc
atcatctgcggcggaagtgcgtacccgcgggattgggattacgccaggctcagggccatc
gcggacaagtgtggtgccatgttgctctgcgacatggctcatataagtggtctcgtcgct
gcacaggaggcttcaaatccttttgagtactctgatgtggttaccactaccacccacaag
agtcttcgagggccaaggtctggtatgatcttctacaggaagggcctgaagcctcctaaa
aaaggccagcctgagggtgctctgtatgactatgaggataagatcaactttgcagtgttc
ccatcactccagggggggcctcacaatcaccagattgctgcgctggccgtagccctgaag
caggccatgtcacctggattcaaggcctatatccagcaggtcaaggcaaacgctgttgcc
cttggaaaccatttgatgagtaagggctacaagctggttactgatggaacagagaaccac
cttgttctctgggatctccgtcctcttggcttgactggtaacaaagttgaaaagctctgt
gacctatgcagcatcacactgaacaaaaatgctgtcttcggtgacagcagtgcgttgtca
cctggtggtgtccgcattggtacacctgcaatgacctcgaggggtttggtcgaggaggac
tttgtgcaggtcgccgagtaccttcatcacgcggtgaccatctgcctgaacgtccaggac
aaacatggcaagcttctcaagaacttcgataagggcttagtgaacaacaaggacattgga
aacctgaaggtggaggttgagaagtttgccacttcatttgagatgcctggcttcagggtg
tctgacatgaagtacaaggattaa

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