Phragmites australis (common reed): 133906315
Help
Entry
133906315 CDS
T10575
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133906315
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133906315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Vps41
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
WD40_RFWD3
WD_LRWD1
MIOS_WD40
Rrn6_beta-prop
PALB2_WD40
FmdE
Motif
Other DBs
NCBI-GeneID:
133906315
NCBI-ProteinID:
XP_062204167
LinkDB
All DBs
Position
23:1368534..1372605
Genome browser
AA seq
483 aa
AA seq
DB search
MGRTIKRAKKAKSKKMTKNGEAPSSSNPAVASGPAKVWQPGVDSLEDGEELQFDPEAYNY
LRGFSIGWPCLSFDVVRDQLGLVRSGFPHTLYGVAGTQAEKASWNYIGIFKLSNINGKKR
EPIPASAVDGDSDMDSDSSSDEEDEEINEDTKPIVHLKKVAHAGCVNRIRSMTQKPHLCA
TLGDTGHVQVWDLSKFLNSLAESETLAHKEDDTILKLLPVKVFSGHKDEGYAIDWSPLVT
GRLVSGDCNKCIHLWEPTSNNWNVDANPFVGHSASVEDLQWSPTEADIFASCSVDGTILI
WDIRTGKKPCISIKAHNADVNVISWNRLASCMIASGCDDGSFSIRDLRLIKEDSLVAHFE
YHKKAITSIEWSPHEASTLAVTSEDHQLTIWDLSLEKDKEEEAEFRAKMKEQANAPEDLP
PQLLFVHQGQKDLKELHWHPQIPGMIISTACDGFNVLMPSNIDTTIPAAEPSNIDTTIPS
AEP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaccatcaagagggccaagaaggccaaatccaagaagatgaccaagaatggt
gaagccccgtcgtcatctaatcctgctgttgcgtctggcccggctaaggtctggcaaccg
ggtgtagattcactggaagatggggaggagctccagtttgatcctgaggcttacaattat
ctccgaggatttagcattggctggccttgcttgagtttcgatgttgtgcgtgatcaactt
ggacttgtccggtcagggttcccacatacattgtatggcgttgctggaacccaggctgag
aaggcttcatggaattatatcggcattttcaagctttccaacataaacgggaagaagcgg
gaacctataccagcttcagcagttgatggtgacagtgatatggatagtgacagcagcagt
gatgaagaagatgaagaaattaatgaagatactaagcccattgtacatctaaaaaaggtg
gctcatgcggggtgtgtaaatcggatacgctcaatgactcaaaaaccgcatctatgtgct
acattgggagatactggtcatgttcaggtgtgggatttgagtaagttccttaattcatta
gcagagtcagagacacttgcgcacaaagaagacgacacaatcctcaagctcttacctgtg
aaagtatttagtggccataaagatgagggctatgcaattgattggagtccacttgttact
ggaagacttgtttctggtgactgcaataagtgcattcacctgtgggagccgacttcgaac
aactggaacgtagatgcaaatccatttgttggacactctgcaagtgttgaagatctacag
tggagccccacggaagccgacatatttgcctcttgttcagtggatggtacaatattaata
tgggatatacgtacagggaagaaaccttgtatttctattaaggctcacaatgctgatgtg
aatgttatctcatggaataggcttgctagctgcatgatagcttcgggatgtgatgatggc
agtttctcaattcgtgatcttagattaatcaaggaggactccttggtagcgcattttgag
taccacaagaaagcaattacatctattgagtggagtccacatgaagcatcaacattggct
gtaacatctgaagaccatcaactcacaatttgggatctttcattggaaaaagataaagaa
gaggaggccgagttcagagcgaagatgaaagagcaggcaaatgcacctgaagatttgccc
ccacaacttctctttgttcatcagggccagaaagatttgaaggaattgcactggcaccca
cagatacctgggatgatcatatcaacggcatgtgacggcttcaatgtgttgatgcctagc
aacatcgatacaaccattccagctgctgagcctagcaacattgatacaaccattccgtct
gctgagccatag
DBGET
integrated database retrieval system
