Phragmites australis (common reed): 133906427
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Entry
133906427 CDS
T10575
Name
(RefSeq) homeobox-leucine zipper protein HOX33 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133906427
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
133906427
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
bZIP_1
ZPR
Homeobox_KN
CCPG1_N
KIP1
Phage_APSE1_p49
HALZ
Motif
Other DBs
NCBI-GeneID:
133906427
NCBI-ProteinID:
XP_062204307
LinkDB
All DBs
Position
23:complement(22038710..22044561)
Genome browser
AA seq
852 aa
AA seq
DB search
MAAVASREKLSPGAGAAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPI
LCNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYD
NGHMRNQLHNPSVATTDTSCESVVTSGQHHQQQNPAVPHPPQRDANSPAGLLAIAEETLA
EFMSKATGTAVNWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDR
ASWYHDCRRVDILHVIPTGNGGTIELIYMQTYAPTTLAAPRDFWTLRYTSGLDDGSLVIC
ERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRP
LYESPKILAQKMTVAAFRHIRQIAHESSGEIPYAGRQPAVLRTFSQRLSRGFNDALSGFP
DDGWSLLSSDGAEDITIAVNSSPNKLVGSDFSPSPLFSAIRGGIMCAKASMLLQNVPPSL
LVRFLREHRSEWADPGVDAYSAASLRASPYAVPVLRAGGFMGSQVILPLAHTLEHEEFLE
VIRLEGHGFSHDEMLLSRDMFLLQLCSGVDEIAPGACAQLVFAPIDESFADDAPLLPSGF
RVIPLDGKTDVPSATRTLDLASALEVGSGGASRASNDASGASNMRSVLTIAFQFSFENHL
RESVAAMGRQYVRAVMASVQRIAMAIAPSRIGSQIEMKHPPASPEALTLARWIGRSYRVH
TGAEIRWSDTEDADSPLMLLWKHSDAILCCSLKPAPMLTFANGTGLDILETTLINIQDMP
LEMVLGDEGRKALFLELPKIMHQQGFAYLPSGVCKSSMGRQASYEQAVAWKVLGDDGVPH
CLALMLVNWTFI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcgagcagggagaagctgtcccctggtgcgggggcagcgccgcaggtg
gacgcgggcaagtacgtgcggtacacgccggagcaggtggaggcgctggagcgcgtctat
agcgagtgccccaagcccagctcgctgcgccggcagcagctcattagggagtgcccgatc
ctctgcaacatcgagcccaagcagatcaaggtgtggttccagaaccgcagatgccgggag
aagcagcgcaaggagtcctctcgcctgcaaactgtgaaccggaagttgagtgcgatgaat
aagctgttgatggaggagaatgaccggctgcagaagcaagtgtcccgtcttgtctacgac
aacgggcacatgcgtaatcagctccacaatccttctgtagccaccacagacacgagctgt
gagtctgtggtgacaagtggtcagcaccaccaacagcaaaacccagcagttccgcatccc
cctcaaagggatgcgaacagcccagcaggtctactcgccattgctgaggagaccttggca
gagttcatgtccaaggcgactggaactgctgtcaactgggtgcaaatggttgggatgaag
cctggtccggattccattggaatcatcgctgtttcgcacaactgtagtggcgtagcagca
agagcttgcggccttgtgagccttgagcccacaaaggttgccgagatccttaaggatcgc
gcatcgtggtatcacgattgccggcgtgttgatatcctccatgttatccccacgggtaat
ggtggaacgattgaactgatctacatgcagacttatgcaccgacaactctggcggcaccg
cgcgacttttggactctccgttacaccagtggccttgacgatggcagtcttgtgatctgt
gaaaggtcattgactcagtccactggaggtccatctggacctaacactcctaattttatc
agagctgaggtgcttcctagtggttatctcattcgaccgtgtgagggaggtggctccatg
atttacattgtggatcatgttgatctggatgcttggagtgtgcctgaggtccttagacca
ctctacgaatctccaaagatccttgcacagaagatgactgttgcggcgtttcgacacatt
aggcagattgcacatgaatcaagtggtgaaatcccttatgctgggcgccagccagctgtt
ctcaggaccttcagtcaaaggctcagcagaggcttcaatgatgctctgagtggctttcca
gatgatggctggtctttgttgagcagtgatggtgctgaggatattacaattgcagtaaac
tcatcaccaaacaagcttgttggatccgacttcagcccctccccattattttctgctatc
aggggtggcatcatgtgtgcaaaagcatcaatgcttctgcagaatgtgccgccttctcta
cttgtgagatttttgagggagcatcgctctgaatgggctgatcctggtgttgatgcttat
tctgccgcctctttgagggccagcccatatgctgttccggttttaagggctggtgggttt
atgggcagccaagttatactacccctcgcacataccttagagcatgaagagttcttggag
gtcattaggcttgaaggacatggctttagccatgatgagatgcttctatctcgggatatg
ttccttctgcagctttgcagtggggttgatgagattgctccaggtgcatgtgcacagctt
gtctttgcacctattgatgaatcttttgctgatgatgcaccactgttgccctcaggtttc
cgtgtgataccactggatgggaagacggatgtaccatctgccacacgcacacttgatctt
gcatctgcccttgaggttggatcaggtggagcttctcgcgcttcaaatgatgcgtctggc
gcgagcaacatgagatcggtcctgacaattgcctttcagttctcctttgagaaccacctt
cgtgagagtgtggcagcaatgggcaggcagtatgtcagagctgtgatggcatctgtgcag
aggattgccatggcaatagctccttcccgcattggctcacagatcgaaatgaagcatcca
ccagcctctccagaggcacttacacttgctaggtggattggccggagctatagggttcac
actggagctgagattcgctggtcggacactgaagatgcggattctcccctgatgctcctc
tggaagcacagtgatgcgatactctgctgttctctgaagcctgctcctatgctcacattt
gccaacggcaccggcctcgacatcctggagacgacgctgatcaacatccaggacatgccg
ctcgagatggtactcggtgacgagggccggaaggcgctgttcttggagctccccaagatc
atgcaccagcagggttttgcatacctccctagcggtgtgtgcaagtcgagcatggggcgg
caggcgtcgtacgagcaggcggtggcatggaaggtgttgggtgacgatggcgtgccgcac
tgcctggccctcatgctggtcaactggaccttcatctga
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