Phragmites australis (common reed): 133906481
Help
Entry
133906481 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133906481
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133906481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133906481
NCBI-ProteinID:
XP_062204390
LinkDB
All DBs
Position
23:3183576..3192746
Genome browser
AA seq
1051 aa
AA seq
DB search
MATAAAEDSIDRKLSALVEEARPRTAALRAAAEAADAVAELIKRVPQQQATPEAAAGFVR
DLGLGDEKLAFVFRPPEVVTVAGSHAAGAVARPDVAADLLVRLPKECFHEKDFLNHRYHA
KRCLYLCVIERSLRSSRLVCKVSWSTFQDEARKPVLHVYPAKEITELPGFYVRIIPTASS
LFNVSKLNLSTRINVRAYAKDGINLPTLKYNSSILEDMFLEENAEFISSTFADWKALQEA
LVLLKVWARQRTSIYTHDCLNGYLISAILVYLAVDSGGSIINRSMTTRQIFRVIMNFLAT
SKVWAKGLVIQPIKKRTGTKEDIANFLKTFDIVICDVSGHVNLTFRMRKSAFLELQDEAA
CTLNCLDKCRDGGFEELFMTKVDFGAKFDSCLRINLKGNSKVTSLSFCLDDESWRILEKD
VQSLLQQGLTDRTKMIRVLWRSTPSEWNIMDGFSEFGSSPLLVGIMLSSLEKSFRLVDIG
PNPENHDEAVKFRKFWGEKAELRRFKDGTIAESTVWESESWEKHTIIRRIADYVLTKHLS
LRQEDMVHVVDQLDFCLLVGGQDPVSSSGALLEAFDTLAKQLRLLDDVPLKISTVQPLDS
AFRHTSVFPPEPHPLAYGKNSQRLPNFTTTCIRSLEVMIQLEGSGNWPLDPVAMEKTKSA
FLLKIGESLEDRGMFVSASEDEVNILTSGYSFLLKIIHERGLLLQKQAGDGNKQSVPSED
EELFLRSQHSSMINGLHGRFQMYGPIVRIAKRWISAHLFSSFISEEAVELVVAYLFLKPY
PFNAPSSRVAGFLRFLRLLSSFDWTFSPMVIDINNDFNLKDEKEINDNFMLSRKSYEQNP
HDIEPAMFLATSYDKASEAWTKHSPSKSVLKRMATYAKSSAELLTNLILHGQSGQYTWEC
LFQTPMSNYDAVVILHQEKLCRPHHVLFPAEVPNGKLVTWGKPSKDFHPYMPLNKGAVKN
WHDARDKLLVNFDPITYFLRDLKCAFPKTFKLWYGSVGGDAVGLTWENPKKRGRDEADES
IREPTCILKEVGDVGKGLVRGVYLIKAPKLQ
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgccgcggaggactccatcgaccgcaagctctccgcgctcgtggaggaa
gcgcggccgcgcaccgcggccctccgcgccgccgccgaggccgcggacgccgtcgcggag
ctcatcaagagggtgccgcagcagcaggcgacgccggaggccgcggcggggttcgtgagg
gacctcgggctcggcgacgagaagctggcgttcgtcttccggccgccggaggtggtaacg
gtcgccgggagccacgcggccggcgcggtcgcgaggcccgacgtcgccgcggaccttctc
gtccgcttgcccaaggaatgtttccatgagaaggatttcctaaatcaccgataccatgca
aagaggtgcctttacctctgtgtcattgagagaagcttgagatcttctcgattagtctgc
aaagtttcatggtctaccttccaagatgaggcacgaaagcccgtcctccatgtatatcca
gcaaaagaaatcacggaacttcctgggttctatgtcaggataatcccaaccgcaagctct
ttgtttaatgtttcaaagctgaatttgtcaacaagaatcaatgtccgtgcatatgcaaaa
gatggcataaacctacccacactgaagtacaatagtagcatattggaggatatgtttttg
gaggaaaatgcagaatttattagcagcacctttgcagattggaaagccttgcaagaggca
ttggttttactaaaagtttgggcacgtcaaagaacttcaatatatacacatgattgcctc
aatggatacttaatatcggccatcctcgtgtaccttgctgtggactctggaggaagcata
attaatagatcaatgaccacaagacaaattttccgtgtcataatgaattttttggcaact
tcgaaagtgtgggccaagggcttggtgattcagccaataaagaagcgtacgggcaccaaa
gaggacattgctaatttcctgaagacatttgatattgtcatatgtgatgtatctggccac
gtaaatctgacatttcggatgaggaagtcagcttttctagagcttcaggatgaggcagct
tgcacgcttaattgccttgataaatgcagagatggtggatttgaagagctttttatgacc
aaggttgactttggtgctaaatttgattcatgcttgaggataaacttgaaagggaactct
aaagttacttcattaagcttttgcttggatgatgaatcttggagaatacttgaaaaagat
gttcagtccttgctacaacaaggccttacagatagaacaaagatgatcagagtcttgtgg
agaagcacaccttctgaatggaatataatggatggtttctcagaatttggtagcagtcca
ctgcttgttggcataatgcttagctcactggaaaagagttttcgtctcgtcgatattggt
ccaaaccctgagaatcatgatgaggctgttaaatttaggaaattttggggagagaaagct
gaacttaggaggtttaaggatggaactattgctgaaagcacagtgtgggaatctgaatct
tgggagaagcacacaattatcagaagaattgctgattatgtgcttacgaagcatttgtcg
ttgcggcaagaagatatggttcatgttgttgatcagcttgatttttgcctcctagttggt
ggccaagatccagtctcatcctctggagctttgctcgaagcctttgatactttagctaag
cagttgcgcctattggatgatgttcctcttaaaatatccaccgtacaacctctagactca
gcttttagacacacttctgtgtttcctccggaacctcatccgttggcatatggaaagaat
tctcagaggctgccgaattttacaacaacttgcattcgatctttggaagttatgattcag
ctagagggatctggtaattggccattggatcctgttgccatggagaagacaaaatctgca
tttcttttaaaaattggtgaaagcctggaggatcgaggaatgtttgtatcagccagtgaa
gatgaggttaatattcttacatctgggtattcgttcttgctaaaaataattcacgaaaga
ggtttgctgttacaaaagcaagctggagatggtaacaaacaaagtgttccatcagaagac
gaggagctctttctgcggagccagcactcaagtatgatcaatggcctgcatggtcgtttc
cagatgtatggaccgatagtcagaatagcaaaaagatggatttcggcacatctgttttct
tcatttatctcagaggaggcagtcgagttggtggttgcctatctatttttgaagccgtac
ccatttaatgccccatcttcacgggttgctggatttcttaggttcttacggttgttatcc
agttttgactggaccttttcacccatggttattgacataaataatgacttcaacctgaag
gatgagaaggagatcaacgacaactttatgctgagcagaaaatcttatgagcaaaatcct
catgatatagagcctgcaatgtttctcgctacatcatacgataaagcatctgaagcatgg
acaaaacattcaccaagcaagtcggttcttaagcggatggctacttatgctaaaagcagt
gcagaacttttaacaaatcttatacttcatggtcaatcagggcaatatacatgggagtgc
ctgttccaaacacctatgagcaattatgatgctgttgttatcctccatcaagagaagctt
tgtcgtcctcaccatgtacttttcccagctgaggttcctaatggtaagttggtaacctgg
ggcaaaccaagtaaagatttccacccttatatgccactcaataaaggggctgtgaaaaac
tggcatgatgcaagagacaaacttttggtaaatttcgacccaatcacatacttcctgcga
gacttgaagtgtgcattccccaagaccttcaagctgtggtatggttcagttggaggagac
gcagttggtcttacgtgggagaacccaaagaagcgtggaagagatgaggctgatgaaagc
atccgggagccaacatgtatccttaaggaggtcggagatgttggtaaaggtttggtgagg
ggtgtatatctcatcaaagcgccaaagcttcagtaa
DBGET
integrated database retrieval system
