Phragmites australis (common reed): 133906725
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Entry
133906725 CDS
T10575
Name
(RefSeq) cellulose synthase-like protein D4
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00520
Amino sugar and nucleotide sugar metabolism
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133906725
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
paua01003
]
133906725
Enzymes [BR:
paua01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
133906725
Glycosyltransferases [BR:
paua01003
]
Polysaccharide
Structural polysaccharide
133906725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
zf-UDP
Motif
Other DBs
NCBI-GeneID:
133906725
NCBI-ProteinID:
XP_062204687
LinkDB
All DBs
Position
23:complement(19334353..19338634)
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AA seq
1206 aa
AA seq
DB search
MSRRLSLPAGSPVTVTVSPVAGGKSGSSPGEAVLKRGGGGGLTSPAPRHSLGGSSSTATL
QVSPVRRSGGSRYLGASRDGAVDNSAEFVHYTVHIPPTPERTTSAAVEEEAEVRPQRSYI
SGTIFTGGLNQATRGHVLNTSGSGAAVAASGNMTCKMRGCDMPAFLTSGGGGQPPCDCGF
MICQECYMDCVAGAENCPGCKEPYSAGGDTDDDGCDDDEAVSSSEERDQLPLTSMAKRFS
LVHSMKVPSSNGCAGGGGKPAEFDHARWLFETKGTYGYGNALWPKDGHGGGGGGTGFAGF
EDLPNFSARCRRPLTRKTSVSQAILSPYRLLIAIRLVALGFFLTWRIRHPNPEAVWLWAL
SVMCEVWFAFSWLLDSLPKLCPVQRAADLDVLAERFEMPTARNPKGRSDLPGIDVFVSTA
DPEKEPPLVTANTILSILAADYPVDKLACYLSDDGGALLTFEALAETASFARTWVPFCRK
HGVEPRSPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRVNYLPEAIRRRSDAYN
AGEELRARRRQQEEAMAAGALPGALPEAATAVKATWMSDGSHWPGTWHTAAPDHSRGDHA
GIIQAMLAPPTSEQVMGGEPVESGGLIDTTGVDIRLPMLVYVSREKRPGYDHNKKAGAMN
ALVRTSAIMSNGPFIVNLDCDHYVHNSAALREGMCFMLDRGGDRICYVQFPQRFEGIDPN
DRYANHNLVFFDVAMRAMDGLQGPMYVGTGCVFRRTALYGFSPPRATEHHGWLGRKKIKL
FLRKPTMGKKTDRENNNDKEMMLPPIEDDGFQQLDDIESSALLPRRFGSSATFVASIPVA
EYQGRLLQDTPGAHQGRPAGALAVPREPLDAATVAEAISVISCFYEDKTEWGQRIGWIYG
SVTEDVVTGYRMHNRGWRSVYCVTRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN
ALFASRRMKLLQRVAYFNVGMYPFTSVFLLVYCVLPAVSLFSGKFIVQSLNVTFLAFLLI
ITITLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVVAGVDISFTLT
SKPGTGDNDSDEDAFAELYEVRWSFLMVPPVTIMMVNAVALAVASARTLYSEFPQWSKLL
GGAFFSLWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMTVSLLWVYISPPAGARERIG
GGFSFP
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggctgtcgctgccggcggggtcgccggtcacggtgacggtgtcgccggtg
gcgggagggaagagtgggagcagtcctggggaggcggtgctgaagaggggcggcggcggc
gggctcacgagcccagcgccgaggcactcgctcgggggctcgtcgtccaccgcgacgctg
caggtctcgcccgtgcgccggagcggggggagccggtaccttggcgcgtcgcgggacggc
gctgtggataacagcgccgagttcgtgcactacaccgtgcacatcccgccaacgccggag
aggacgacctccgcggcggtggaggaggaggcggaggtgcggcctcagaggagctacatc
tcggggaccatcttcaccggcgggctcaaccaggccacgcgcggccacgtgctcaacacc
tccggctccggcgcggcggtcgccgcctccgggaacatgacgtgcaagatgcgcggctgc
gacatgccggcgttcctgacctccggcggcggcgggcagccgccctgcgactgcgggttc
atgatctgccaggagtgctacatggactgtgtcgccggcgccgagaactgccccggctgc
aaggagccgtactccgctggtggtgacaccgacgacgacggctgcgacgacgacgaggcc
gtctcctcgtcggaggagcgggaccagctgccgctgacatcgatggcgaagcggttctcc
ttggtgcactccatgaaggtgcccagcagcaacggctgcgccggcggcggcggcaagccg
gccgagttcgaccacgcccggtggctcttcgagaccaaggggacctacggctacggcaac
gcgctgtggcccaaggacggtcatggtggcggcggcggcggcactggcttcgctgggttc
gaggatctgcccaacttcagcgcccggtgccgccgaccgctgacgaggaagaccagcgtc
tcgcaggccatcctcagcccttacaggctgttgatcgccatccgtctggtggctctgggg
ttcttcctaacatggcgcatccggcacccgaacccagaggcggtgtggctgtgggcgctc
tcggtgatgtgcgaggtgtggttcgccttctcatggctgctcgacagcctccccaagctc
tgtcctgtccaacgcgccgccgacctcgatgtcctggccgaacgcttcgaaatgcccacc
gcacgcaaccccaagggccgctccgacctccccggcatcgacgtcttcgtctccaccgcc
gacccggagaaggagccgccgctcgtcaccgccaacaccatcctctccatcctcgccgcc
gactacccggtcgataagctggcctgctacctctccgacgacggtggcgcgctcctcact
ttcgaggcgctcgctgagaccgccagcttcgcgcgcacctgggtgcccttctgccggaag
cacggcgtcgagccacgcagccccgaggcgtactttggacagaagagggacttcctcaag
aacaaggtgcgagttgacttcgtccgggagcggaggaaggtgaagcgggagtacgacgag
ttcaaagtgagggtgaactatctgccggaagcgatacgccggcgctccgacgcatacaac
gccggtgaggagctgcgtgccaggaggcggcagcaggaggaggccatggcggccggcgcc
cttccaggagcgttgcccgaggccgcgacagctgtgaaggcgacatggatgtctgacggc
tcgcactggcctggcacatggcacaccgccgcgccggaccactcccgcggcgaccacgct
ggcatcattcaggcaatgctggcgcctccgacgtcggagcaggtaatgggaggggagccg
gtggagtccggcgggctgatcgacacgacgggagtggacatccggctgccgatgctggtg
tacgtgtcccgcgagaagcggccggggtacgaccacaacaagaaggccggcgccatgaac
gcgctggtccgcaccagcgccatcatgtccaacgggcccttcatcgtcaatctcgactgc
gaccactacgtgcacaactcggcagcgctccgggaggggatgtgcttcatgctcgaccgc
ggcggcgaccgcatctgctacgtccagttcccgcagcggttcgagggcattgatcccaac
gaccgctacgccaaccacaacctcgtcttcttcgacgttgccatgcgcgccatggacggg
ctgcagggccccatgtacgtcggcactgggtgcgtcttccgccgcaccgcgctgtacggg
ttcagcccgccgcgcgccaccgagcaccacggctggctcgggaggaaaaagatcaagctg
ttcctgaggaagcccaccatgggaaagaagacggacagggagaacaacaacgacaaggag
atgatgctgccaccgatcgaggatgacggcttccagcagctcgacgacatcgagtcgtcg
gcgctgctccctcggcggttcggcagctcggcgacgttcgtggcgtcgatcccggtggcc
gagtaccaggggcggctcctgcaggacacgccgggcgcgcaccagggtcgccctgccggc
gcgctggcagtgccccgcgagccgctagacgcggccaccgtcgccgaggccatcagcgtg
atctcgtgcttctacgaggacaagacggagtgggggcagcgcatcgggtggatctacggg
tcggtgacggaggacgtggtgaccgggtaccggatgcacaaccgcgggtggcggtccgtg
tactgcgtgacgcggcgcgacgcgttccgcggcacggcgcccatcaatctcaccgacagg
cttcaccaggtgctccggtgggcgacgggctccgtggagatcttcttctcccgcaacaac
gccttgttcgcgtcccggcgaatgaagctcctccagcgcgtcgcctacttcaacgtcggc
atgtacccgttcacctcggtcttcctgctcgtctactgcgtgctcccggccgtctccctc
ttctccggcaagttcatcgttcagtcactcaacgtcaccttcctggcgttcctgctcatc
atcaccatcacgctctgcctgctggcgctgctggagatcaagtggtccgggatcacgctg
cacgagtggtggcgcaacgagcagttctgggtgatcggcggcacgagcgcacacccagcg
gcggtgctgcagggcctgctgaaggtggtcgccggcgtggacatctccttcacgctgacg
tccaagccgggcaccggcgacaacgacagcgacgaggatgcgttcgccgagctgtacgag
gtgcggtggagcttcctgatggtgccgcccgtgacgatcatgatggtgaacgcggtggcg
ctggcggtggcgtcggcgcgcacgctgtacagcgagttcccgcagtggagcaagctgctg
ggcggcgccttcttcagcctctgggtgctctgccacctctacccgttcgccaaggggctc
ctggggcgccgcggccgcgtgccgaccatcgtgttcgtctggtcggggctcatctccatg
accgtgtcgctgctctgggtctacatcagcccgcccgccggcgccagggagcgcatcggc
ggcggcttcagcttcccgtag
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