Phragmites australis (common reed): 133906763
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Entry
133906763 CDS
T10575
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
paua03410
Base excision repair
paua03420
Nucleotide excision repair
paua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133906763
03410 Base excision repair
133906763
03420 Nucleotide excision repair
133906763
03430 Mismatch repair
133906763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133906763
03036 Chromosome and associated proteins [BR:
paua03036
]
133906763
03400 DNA repair and recombination proteins [BR:
paua03400
]
133906763
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133906763
DNA Replication Termination Factors
ELG1-RFC complex
133906763
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133906763
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133906763
Check point factors
HRAD17(Rad24)-RFC complex
133906763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_5
AAA_11
AAA_14
AAA_assoc_2
AAA_16
ResIII
SLFN-g3_helicase
AAA_24
PhoH
AAA_2
nSTAND3
AAA_28
AAA_19
AAA_30
AAA_7
DNAX_ATPase_lid
Cdc6_lid
AAA_25
RNA_helicase
AAA_17
NB-ARC
bpMoxR
TIP49
AAA_18
Parvo_NS1
ATPase_2
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133906763
NCBI-ProteinID:
XP_062204746
LinkDB
All DBs
Position
23:3913370..3918869
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPTSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSS
RILHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAACLFGSSISSSDLISVSGVIP
EDVVKSLLAACKSGEFDAANKEVSNIIADGYPVSQLISQFLDVIVSADDIPDLQKARICI
KLGETDKCLTDGADEYLQLLDVASETIRALFNMSQALVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgacgtcgcagccatgggtggagaaataccgaccgaggcaggtg
aaggatgtggcgcaccaggaggaggtgatccgggtgctcaccaacacccttcagaccgcc
gacctgccgcacatgctgttctacggcccgcctggcaccgggaagactaccaccgcactt
gccattgcccaccagctctacggtccagaactgtacaagtcaagagttttagagcttaat
gctagtgatgatcgtggaattaatgtggtgaggacaaaaatcaaggactttgctgctgtc
gctgttggttctgcacgaaaagcgggttatccctgcccaccatacaagatcattattctc
gatgaagccgattcgatgacagaagatgcccagaatgctttgaggcgtactatggagact
tactccaaagttactagattcttttttatatgcaattatattagcaggataatagagcca
cttgcatccagatgtgcaaagtttaggttcaagcctctttcagaagaagtgatgagcagc
cgcattttgcatatatgcaatgaagaaggcctcaatcttgatgctcaggcattgtccaca
ctaagtgccatttctcaaggtgatcttcgccgtgctataacctatcttcagagtgcagcg
tgcttatttggatcttctatttcttccagtgacttgatcagtgtttctggggtcatccct
gaagatgttgtgaagtcactgcttgcagcttgcaaatctggtgaatttgatgcggcaaac
aaggaagttagcaacataattgcagatgggtatccagtttcacagctgatatcacagttt
ctagatgtgattgtcagcgcggatgatattccagatttgcaaaaggcaagaatatgtata
aagcttggggagactgataagtgcttgaccgatggggcggatgagtatttacagcttttg
gatgtcgccagcgaaactatccgtgctcttttcaacatgtcacaagcgttggtcttctaa
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integrated database retrieval system
