Phragmites australis (common reed): 133906987
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Entry
133906987 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133906987 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133906987
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
General mRNP proteins
133906987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
DUF3280
Motif
Other DBs
NCBI-GeneID:
133906987
NCBI-ProteinID:
XP_062204937
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Position
24:complement(7741965..7749217)
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AA seq
646 aa
AA seq
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MEFDEYEYLEKAVEPAAPPANGSGEKDRGSRRREGGEERVSKRSRSGEDRDRHRSGREHR
DRDDGKEKEKEKEKSRERGKDREGRDREKEKEKERERRRHSERDAERERERRSRSRSERR
RAEEEEMVRELERERERSERHHYRDRDVRRKKDDGTEPIVDPERDQRTVFAFQLSLKADE
RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGLVAVIYAPVYIEFYDVMSVPMAIALSGQP
LLGQQVMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVE
LVQLPLDPLTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQVSGA
TTGDLDDDEGGGLSLNASSRAALMLKLDRSGTATSLTGGIGAAGVSTSMALPATSVIGAP
PAGAPLLQQTVSAVGSIPVAPVLPVTTQSVGMSAPTEFLLLKNMFDPAVETDPDFDLDIK
DDVQEECSKFGLVKHIFIDKNTSGFVYLHFDGVMAATKAQQALHGRWFAGKMITATFMLM
WRRVGKRARSTYPFKVVVSGVSFAGIHLVIVRQDSCDIGVSSALYVLYGIAWLQGLSCGA
QCWTCWVICLVVSDETVQLSNVSGCMAYATFRPTNGLGLLGLGWVC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgacgagtacgagtacctggagaaggcggtggagcccgccgccccgccggcc
aacggctccggcgagaaggaccgcggctcgcgccgccgcgagggcggcgaggagcgcgtg
tcgaagcgctcccgctcgggggaggaccgcgaccggcaccgcagcggccgcgagcaccgg
gaccgggatgacgggaaggagaaggagaaggagaaggagaagagccgcgaacgcgggaag
gatagggaggggagggaccgggagaaggagaaggagaaggagagggagaggcgtaggcac
agtgagagggacgcggagagggagcgggagcggaggagccggagccggtcggagcggcgc
cgcgctgaagaggaggagatggtgagggaactggagcgggagcgcgagcgcagcgagcgc
caccactaccgtgaccgtgatgtcagacgtaagaaagatgatggtacagaaccaatagtt
gatccagaaagggaccagaggactgtatttgccttccagctatccttgaaggcagatgaa
agagacgtttatgaattcttctcaagggctgggaaggtccgcgatgttcgccttattatg
gaccgaaactcacgacgttctaaaggagttgggttagttgccgtgatatatgcccctgtg
tacatcgagttttacgatgttatgtctgttccaatggcgattgccctgtctggccaacct
cttcttgggcaacaagtgatggttaagccatcagaggctgaaaagaacttggttcagtca
aatgcaacatcaggtggtgcagcttcaggtggagcaagaaagttgtatgttggcaatctt
cactccaatatcaccgaggaccaattgagacaagtcttcgaaccattcggccaagtggag
cttgtacagctacctctagatcccctgactgggctgtgcaaaggttatggtttcattcag
tttgcacggcttgaagacgcaaaagctgcacagagcttgaatggtcagcttgatattgct
ggcagagtaattaaggtttcagctgttactgatcatgtgggtgtccaagttagtggagca
actactggagatttggatgatgatgaaggtggaggcttgtcattaaatgcaagctccaga
gctgctcttatgctgaaattggaccggagtggcactgcaaccagcttaaccggtggtatt
ggtgctgctggggtgagcacctccatggctctaccagcgacatcagttattggggctcct
ccagcaggtgctcctcttctacagcaaacagtatctgctgttggatcaattcctgtggca
cctgtgcttcctgttaccactcaatctgtgggcatgtctgcacctactgaattcctattg
cttaagaacatgtttgacccagcagtggagacggatcctgattttgatttggatattaaa
gatgatgtccaagaagaatgttccaagtttggcttagtgaagcacatttttattgacaag
aatacttctggctttgtgtatctgcatttcgatggtgtgatggcagcaacgaaggcacaa
caagcacttcatggaagatggtttgccggaaagatgattacggcaacctttatgcttatg
tggcgaagagttggcaagagggcaagatccacttatccgttcaaagttgtagtaagtggt
gtatcgtttgcaggaatacatttagtaattgtacggcaggatagttgcgacattggtgtc
agttcagcactgtatgtactgtacggcatcgcctggttgcaaggcctttcttgtggagca
caatgctggacttgctgggtgatttgtttggttgttagtgatgaaacagttcaattatca
aacgtctctggctgcatggcgtatgcaacgtttaggcctaccaatgggttgggtttgctt
gggttgggttgggtttgctaa
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