Phragmites australis (common reed): 133907049
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Entry
133907049 CDS
T10575
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133907049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133907049
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133907049
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133907049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF3134
Motif
Other DBs
NCBI-GeneID:
133907049
NCBI-ProteinID:
XP_062205028
LinkDB
All DBs
Position
24:4352371..4366784
Genome browser
AA seq
1181 aa
AA seq
DB search
MSTKTKLAAPAAAKEGEYAALRELFRPHVESFDYFLDKGLDEMLLSIRPMEITDPNSSTT
LRISLEKGHVLPPMRDGRLGVPLYPQECRQARITYHGEFKVDVCLQCNEGPQVSQSFNFG
HLPIMLMSKLCHLRDADPHKLVFHGEEATEMGGYFICGGMERLIRILILQKRNYPMGLVR
GSFLKRGAGYTDKAVIIRCVHSDQSSVTIKLYYLQNGSARLGFWLGGREFLLPIGIVLKA
LIDTSDREIFTSLTCCYSDKYGRGKGVVSTQLIGERAQIILDEVRDLSLFTRTQCLMHIG
QYFRSVMEGFEKDDYETVAEAVLRDYIFVHLQYNHEKFNLLIFMLQKLYALVDQTASPDN
ADALQYQEALLPGHLITVFLKDRLQDWLRKSKRLIIEEAAKNKSFDLSNAQEIRKFLTKY
TTSVGRAIESMIKIGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSAFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGVVKNFEGIKKSLSA
ELVRVGMNPVSPKIERTGPPEVLHVHLDGCIVGTVAAAKIEEAVNYLRTLKLLAHSGIPE
DLEVGYVPLSLGGAYPGLYLFTNPARFVRPVRNLFSLPDRKQSIELIGPFEQAFMDIRCP
DGGDGGRKELFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQAL
KFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSA
VDRGMFRGHIYQTECIDLSKKDRENVPEIFAKSVLSRDTSTVIDSDGLPRLGETVHPNEQ
YYSVYNRLTGAIRPVKLKGTESAFIDYVAVNGASSKGDLQKANIRLRRVRNPIIGDKFSS
RHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESVAAKAGSLHGKF
INATPFANSVKEEDKDPCKSNSTVDELGPMLASYGFNYHGTEVLYSGVFGTEMTCEIFIG
PVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSAYLLH
DRLHSCSDYHIADVCSLCGSLLTATIIKSETQKKAKREMLGLPSVRPPKNFACQACKTSK
GMETVAMPYVFRYLAAELAAMNIKLDLRLSNRTELPPSQES
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaaaactaagttggccgcgccggcggccgctaaggagggcgagtacgcggcg
ctgcgggagctgttccggccgcacgtcgagtcgttcgactacttcctcgacaagggtctc
gacgagatgctcctctccatccgccccatggagatcaccgaccccaactccagcactacc
ctaagaatatcattggagaagggtcatgtgctcccgccgatgagggatggtcggttgggt
gtacccctctacccccaggagtgcaggcaagcaagaattacatatcatggggaatttaaa
gtggacgtctgcctccagtgtaatgaagggccacaagtcagccagagcttcaattttggt
catttgcctattatgttgatgtcaaaactgtgccatctgagagatgctgatccacataaa
ttagttttccatggtgaagaggcaacagaaatgggcgggtacttcatctgtggcgggatg
gagcgacttatacgaattcttattttacaaaagcgtaactatcctatgggcttggtgcgt
ggttcttttcttaaacgtggtgctggatacactgacaaagcagttatcataagatgtgtc
cacagtgaccagtccagtgtgacaataaagttgtactacctccaaaatggaagcgcaagg
cttgggttttggttggggggcagagagtttctccttcctattgggattgttctcaaggcc
cttattgatacaagtgacagggagatctttacaagcttgacgtgctgctacagtgataaa
tatggaagaggaaagggagttgtcagtactcaactaattggtgaaagggcacaaataatt
cttgacgaagtcagagatctgtcccttttcactcgcacgcaatgtttgatgcatattgga
cagtacttccgatctgtgatggaaggctttgaaaaagatgactatgaaactgttgctgaa
gcggttctgagggactatatttttgtgcacctgcaatacaaccatgaaaaatttaatcta
ttgatatttatgctgcagaaactttatgctctcgtagatcaaactgcttcacctgacaat
gctgacgcactacaataccaggaggctctcttgcctgggcacttaatcacagtttttctg
aaggatagacttcaagattggctaagaaagtctaaacgtttaatcatcgaagaggctgca
aagaacaaaagttttgatctcagtaacgcacaggagattaggaaatttcttactaaatat
acaacatctgttggtagagctatcgagagtatgataaagattgggaaagtaaattcacaa
tcaggattggatcttccacagagagatgggatgaccattcacgctgaacggctcaacttt
catcgttatatctcacacttccgttctgttcataggggttctgcttttgctaaaatgcgc
acgacatctgttagaaagttacttccagagtcctggggtttcctgtgtccagttcatacg
cctgatggagagccttgtggtttactgaaccatatgacttccacatgtcgtatttcatcg
ttctacaactcagaaggggtggttaaaaattttgagggaataaagaagtcgctttctgct
gagttggttcgtgttggaatgaacccagtgtcgccaaagattgagcgaactggtccccca
gaagtattacatgtgcatttggatggatgcattgttggtactgttgctgctgctaagatt
gaggaagcagttaactatcttcgaacattaaaacttctggcgcactcagggattcctgaa
gatctggaagtgggttatgttcccctaagtctcggtggagcttatcctggcctttacctt
tttacaaatccagctagatttgttcgacctgtcagaaatctttttagtttacctgataga
aagcaaagtattgagcttattggaccatttgaacaggcatttatggatatacggtgtcct
gatggtggggatggtgggagaaaagaattatttcctgcaactcatgaagaaatccaccct
acagccattctcagtgtagttgccaatctgacaccttggtctgatcacaaccaaagtcct
aggaacatgtaccaatgccagatggcaaagcaaaccatgggtttttgtgggcaagcccta
aaattccgtactgatgtaaaagcattccatctacagaccccgcagacaccaattgttcgg
acagctacatatagcaaatattgtatggatgaatttccatcaggaacgaatgctattgtt
gcagtgctgtcatacacaggttatgacatggaggatgccatgattttgaataaatcagct
gttgatcgtggaatgttccgtgggcatatttaccagactgaatgcattgacttatcaaag
aaagatagagaaaatgttccagaaatctttgccaagagtgtattatcaagggacacgagc
actgtgattgattcagatggccttcctcgtcttggagagacagtacatccaaatgagcag
tactacagtgtctataacagactcacaggtgcgataaggcctgtcaaactaaaaggcaca
gagtcagcatttattgactatgttgctgtcaacggggcaagttcaaaaggtgacctgcag
aaggcgaatattcgtctgcgtcgtgtgagaaaccccataattggtgacaagttcagcagc
agacacgggcaaaagggcgtttgttctcagttatggcctgacattgacatgccattctct
gcaaataccggcatgaggccagatctgatcattaatcctcatgcatttccttcaagaatg
actatagcaatgctcttagagtctgtggcagcaaaggctggaagtttgcatggaaagttc
attaacgcgacaccttttgcaaactcagtcaaagaggaggacaaagatccctgtaaatct
aattcaactgtagatgaattgggtcccatgcttgcatcttatgggttcaattatcatgga
acagaggtcctttatagtggagtatttggcactgagatgacctgtgagattttcattgga
cctgtttattaccagcgtctacgtcatatggtctcagataaatttcaggtccgcaccacg
ggtcgtatagatcagataacaagacaaccgattggaggaaggaagcacggtggcgggatt
cggtttggtgagatggagcgcgacgctctcctcgcccatgggtctgcctatctcctgcat
gacaggctccactcctgctcagactaccatatcgccgacgtgtgctccctttgcgggagc
ttactgacagcgacgataatcaaatcggagactcagaagaaagccaagcgcgagatgctt
gggctcccctccgtgagacctcccaagaactttgcctgccaggcctgcaaaacgagcaag
gggatggagaccgtggcaatgccgtacgtgttcagatacctggccgccgagctagcggcc
atgaacataaagctggacctccggctgagcaacaggacagaattgcctcccagccaagaa
tcctga
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integrated database retrieval system
