Phragmites australis (common reed): 133907097
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Entry
133907097 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133907097
KO
K23288
syndetin
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133907097
Membrane trafficking [BR:
paua04131
]
Protein recycling
Others
EARP complex
133907097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EXOC6_Sec15_N
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
133907097
NCBI-ProteinID:
XP_062205104
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Position
24:complement(2055216..2065835)
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AA seq
1085 aa
AA seq
DB search
MQRDATPPTASPASSSCSSLFGGEQLFESGPGPLVFLPLLLIQGGGMDLSRVGEKLLSSV
RSARSLGLLPPTPSASPSRPEVPERAAAAAAVARAIAGLPPHERINLPSNSEDLVSIYGS
NPQGQPVEELEEVFYEEEFDPIKYILQSIPDEGGDTTYFDKQSTLRLAQLDKIAERLSHH
VMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNEVSRDLVVNVKSKKKQALL
DVLPILTELCQALDMQMELETFVEKENYFQAFQLLPEYLQVLENYSGLSAIQEMGRGIEA
WLARTIQKLDTHLLGVCQIFNEESYLTVIDAYALMGDIGGMAEKMQSFFLQEVLSQTHCV
LKEMLEEEIGNNTHRNRFTYSDLCVQVPESKFRPCLLRTLESLFSLMCSYYAIMSFSPGE
KNIESKGPDLVDKNTASQSKNGILVDSGRGQSSATVNQDGSAAEKSDRTSSSEVSNPGAS
TSGAGSPFYQLRTDATKLVAHTFERGRRNLWQLATSRLSVLLSSSAVCSTSTYQFLKNYE
DLTIVILAGEAFCGFEASEFRQKLKTVCLNYIVSFHRQNIYALKMVLEKESWTIMSAEAS
QIISLAGLTGDGAALISPTGRSSNLPINCYRENSTAANSGKQKNGFASWLKIENPFSSKL
ENGSVESPKSNMLFDSSAGNSHGNGNNSSFDEENEDLLADFIDEDSQLPSRIPETRIVKG
NSSHWKDGDISSQTGSSISLLRMMDKYARLMQKLEIVNVELFKGISQLFGIFYHYIYETF
GHQDRSQSGKPLRDYQSFRLKATLSKITQDSDQWVKPQNIPYSPSSAISINSTFAQMDVM
PTAPPSSMFTSYGLKERCAAAETLLLVARVLNRSRAHLHSVLSKKNTSAVEEFFRTLVDS
VPDLAEHIHRTSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDH
GGISKELQHLLLEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSANV
KPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRLETVDK
IEAGP
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgcgacgccgcccaccgcctccccagcctcctcctcgtgctcctccctc
ttcggcggcgagcagctattcgagtccggccccggcccgctcgtcttcctgcccctgctc
ctgatccagggtggcggcatggacctctcccgcgtcggtgagaagctcctcagctccgtc
cgctccgcccgctcgctcggcctcctgcccccgaccccctcagcgtccccttcccgtccc
gaggttccagagcgagctgcagcggcggcggcagttgcgcgtgcgatcgcagggctgcca
ccgcacgagaggatcaacctgccgtcgaattcggaggacttggtctccatctacggtagc
aacccgcaggggcagcccgtggaagagctcgaggaggtgttctatgaggaggagttcgat
ccaataaaatacattctgcaaagtattccggatgaaggtggcgacaccacctatttcgat
aagcagtctaccttgagattagcgcagcttgacaagattgcagaacgattgtcgcatcat
gttatgggtcaccatgaagaaatggtgaaggggatgcagttagtgatggaattagaacaa
gacttaaaggttgcaaatgtaatctgcatgaacggacgaaggcatataacctcatcgaag
aatgaggtgtcaagggatctggttgtgaatgtaaaatcaaagaagaaacaagctttgctg
gatgttcttcctattcttacagagctttgtcaggcactagacatgcagatggagcttgaa
acttttgttgagaaagagaattactttcaggcatttcaattattgccagagtatttgcaa
gtcttggagaattattcaggcctttctgccatacaagaaatgggacgagggattgaggca
tggttagctcggacaatccaaaagttggacacccatttactaggtgtttgtcagattttc
aatgaggaaagctatctaactgtaattgatgcctatgcattgatgggtgacattggtggc
atggctgaaaagatgcagagtttctttttgcaggaagtactctctcagacacattgtgtc
ctgaaagaaatgttggaagaggagatcggaaacaatacacatagaaataggtttacatat
agtgatctttgtgttcaagttcctgagtccaaatttcgcccctgtttgttgagaaccctt
gagagcttattttcattgatgtgctcatattatgctattatgagcttttccccaggagaa
aagaatattgagtccaagggcccagatctagtagacaagaatacggcatctcagagtaaa
aacggaattttagttgattcaggaagaggtcagtcaagtgcaacagtcaatcaggatggt
tctgcagctgaaaagagtgacagaacatcgtcatcggaggttagcaatcccggtgctagt
acatcaggagcgggttctccattctatcagctgaggacagatgctacaaaacttgttgcg
catacatttgaaagagggcgaagaaatctttggcaactggcaacaagtcgcttatctgtt
ttactgtcgagttcggctgtttgttcaactagcacataccaattcctgaagaactatgaa
gatctcaccattgtcattttggctggtgaagcattttgtgggtttgaagccagtgagttc
cgccagaagttgaagactgtctgtttgaactacatagtgtccttccaccggcaaaatata
tatgcacttaagatggtattggaaaaggaatcttggacaataatgtctgctgaagcttca
cagataattagtttagcaggcctaactggtgatggtgctgcactgatctctcctacgggt
cgcagttccaacttgccaataaactgttaccgtgagaattctactgcggccaattcagga
aagcaaaagaatggatttgcttcttggcttaagattgaaaacccattttcttctaagcta
gaaaatggctccgtggaatccccaaagtccaatatgctttttgactcatcagctggtaat
agtcatggcaatggaaataattcatcttttgatgaagagaatgaagaccttctcgcggat
ttcattgatgaagatagtcagttgcctagcaggataccagaaacaagaattgtaaaaggc
aattcttcgcattggaaagatggagacatttcatcacagacaggctcatcaatttcttta
ttaaggatgatggacaaatatgctaggctaatgcaaaagctggaaattgtcaatgttgag
ctttttaagggtatctcccaactgtttggcatcttttatcactacatatatgagacattt
gggcaccaggacaggagtcaaagcggcaagcctttacgagattatcaatcatttcgactt
aaagccactttatcaaaaataacacaagactctgatcagtgggtcaagccacagaatatt
ccatattcaccttcatcagctatttcaattaattcaacttttgctcaaatggatgtgatg
cctactgcgcctcccagctcaatgttcacctcctatgggttaaaggagagatgtgcagct
gctgaaacattattgttggttgctcgagtgttgaacagatctagagcacatctacactca
gtgttgtctaaaaaaaacacttctgctgttgaagagttctttaggacactggtggattct
gttccagatttggcagagcacattcataggacaagtgcacggatgcttttgcatattgat
gggtatccagataagattgcaaatgctaaatgggaggtgaaggagcttggcatagagcac
aatggatatgttgatttgttattgggtgaattcaaacactacaaaacaagattggaccac
ggaggaatttctaaggagctccaacacctcttgctggagtatggcatagagagcatcgca
gaagtgttagtcgaaggtctttctagagtgaaacggtgcaccgatgaagggcgtgctttg
atgtcacttgacctccaggtactaattaatggactgcagcacattgtatcagcgaatgtt
aaaccaaagctgcaaactgtggacactttcataaaggcttattatttgccagagaccgag
tatgttcactgggcacggtctcatccagaatacagcaaaagtcaggtcgttgggttggtt
aacctggtggccaccatgaaaggatggaaacggaaaacgagattggaaacggtcgataag
attgaggcaggaccatag
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