Phragmites australis (common reed): 133907105
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Entry
133907105 CDS
T10575
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133907105
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133907105
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
133907105
NCBI-ProteinID:
XP_062205114
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Position
24:complement(4406359..4413702)
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AA seq
753 aa
AA seq
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MDYDNSRRSNSKKRTRFNSDDGKRKRLNSRHDDTSMSSEPIETIYRILCPVKKIGSVLGR
GGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQSERADEAAENISNDGLENMKPH
CSAQDALLKIHDKIVADEVAHEKSETVDDVIARILVPGNQVGCLLGKGGSIIQQLRADTG
AGIRVLPSENLPQCALKSDELVQISGVPSLVRKALYEISTRLHQHPRKENAPLEEIIDAS
TQRKRESPPPLPHGNPMLPHLHVDHPPPIPLLDPYRNGPLRYPVAEAEEFSVRILCASEL
IGSVIGKNGANVRQVEQQTGARIKVQEVGKDASGERLIIVSSKEIPADPISPTIEALIML
HDKVSAPSEKRHLSTRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSF
DDELVQVAGPPDIARGALTEIASRLRTRTLRDASSTNNPPPVAPFDGPPVDIFPSREFTL
YGRPANDPPYGRPANDPPYGRPANDPPYGRPANEPPYGRPANEPPYGRPSSNIPYGRLNE
SAPRDHSSAYPVDYFSKREYPSGSPPFVSNVPSYAYQRYAVPARLPTRELPLSFSTGVDY
MSHHSYRDHVPTDCYSSRGTQQLGVTRDGNSNAYDYTEAAGRMHGCEDYRGLTGVTATGR
FSSTIELRIPSSSLDSIVGVGGVNLAEIRQISGARLRLLEAHAGSSESVVEIQGTLDQTK
AAQSLLQGFISANSRGAQQPSHSSRMPHYPSWG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggattatgataattctagaagaagtaattccaaaaagaggacgcgtttcaattctgat
gatggaaagaggaaacgattaaattccaggcatgatgacacatctatgtcctctgagcca
attgaaaccatttacaggatattgtgcccggtaaaaaagataggtagtgtcttagggaga
ggtggtgacattgttaaggcccttagagaggaaactaaagcaaagataagggttgctgat
tccattcctggtgcagacgagagagtgattatcatcttcaactaccaaaatcaatctgaa
cgagctgacgaagcagctgaaaatatttctaatgatggcttagagaacatgaagccccat
tgttctgcccaagatgccttgttgaagatacatgataagattgtggcggatgaagttgcc
cacgaaaagtctgaaactgttgatgatgtgattgctcgaattttggttccaggcaatcaa
gttggctgcctgttaggaaaaggtggctctattatacaacaattgcgagctgatactggt
gcagggatccgtgtcttgccatctgaaaaccttccccagtgtgcacttaaaagtgatgaa
ctggtgcagatatctggagtaccttctcttgtaagaaaagctctctatgaaatatctact
cgtctgcatcaacatcctcgtaaagaaaatgcacctcttgaagaaataatagatgcaagc
acacaaaggaaacgcgaatctccaccaccattaccacatgggaatccaatgttgccacac
ctgcatgttgatcatccaccacctatacccttgcttgatccatatagaaatggaccattg
cgatatcctgttgctgaagctgaagagttttctgtcagaattttgtgtgcttctgagctc
atcggttcagttattgggaaaaacggggccaatgttcggcaggtagagcagcagactggt
gctcgaattaaggttcaagaagttggcaaagatgcttctggagaaaggctgattattgtt
tcatctaaggagataccagctgatccaatatccccaacaattgaggcacttattatgctc
catgataaagtaagtgcaccttctgagaaacgccatttgagtacgaggcttgttgtacca
tcaagcaaagttggctgtattcttggggaaggtgggaaggtaattactgaaatgagaagg
cgaactggggctgaaattcgagtttactcgaaggcagataaaccgaagtacttgtctttt
gatgacgagcttgtgcaggttgctgggcctccagatattgcaagaggagccctcacagag
attgcttcgagacttagaactaggactttgagggatgcaagttccaccaataatccccca
cctgttgccccttttgatggtccccctgttgatatcttccctagcagggaattcacgtta
tatggaaggcctgccaatgatccaccatatggaaggcctgccaatgatccaccatatgga
aggcctgccaatgatccaccatatggtaggcctgccaacgagccaccatatggaaggcct
gccaacgagccaccatatggaagaccttccagtaatataccttatggaagactgaacgaa
agtgcacctcgtgatcattcctctgcatatcctgtagattacttttctaaaagagagtat
cctagtggaagccctccgtttgttagtaatgtcccatcatatgcttatcagagatatgca
gtgcctgctcgcttgcctactagagaacttcccttgtcatttagtaccggtgtggattat
atgtcccatcattcttaccgtgaccatgtgcctactgattgctactctagtaggggtaca
cagcaattaggcgtcacaagagatggaaattcaaatgcttatgactataccgaggctgct
ggacggatgcatgggtgtgaggattatcgaggactgacaggtgttaccgccactggccgg
ttctcaagcactattgaactgaggattccaagtagttctttggattctattgttggagtt
ggtggggtcaatctagcagagattcgtcagatttctggtgcaagattgaggttacttgaa
gctcatgctggttcttctgagtctgttgtggagatccagggcacgctagaccaaacgaaa
gctgcgcagagccttctgcaaggcttcattagcgcgaacagccgaggcgcgcagcagcca
tcccattcttctcgcatgccgcattacccaagctggggctag
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