Phragmites australis (common reed): 133907298
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Entry
133907298 CDS
T10575
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133907298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133907298
04121 Ubiquitin system [BR:
paua04121
]
133907298
03029 Mitochondrial biogenesis [BR:
paua03029
]
133907298
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133907298
Atg8 conjugation proteins
133907298
Ubiquitin system [BR:
paua04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
133907298
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133907298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
133907298
NCBI-ProteinID:
XP_062205291
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All DBs
Position
2:28410661..28416685
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AA seq
1044 aa
AA seq
DB search
MAGFPRPLQVLAIQSCAEEGFWDALRRLKLDVLGTDDSPVPITGYYTPRQNPKVASLLRL
CPESLVPPSASDNSIGSRNNCPVPGTLINTNNMRGFQNLDRELLLRAEAKKILHDIMSGK
VEENPALLIRFLVISFADLKNWKVYYNVAFPSLVFNSKMTLLSLQYASQVLSKEEAASLY
RSLQEWRTCSETTVVPFFLISISSDLSVSVRQLKDWKACQGSCQKLLFGFYDHGCQVIRS
LGRGNAKLDFPGWALRNYIAFLSMRWKIENVQFFCYREHRGQPDLEQSYIGEASFPPPYG
CDDPDYVPEAIGWEGEKPGKGTKEMKPKEINLQSMNPASQDEEKQLMHLKLMGWRHFPVN
IDKLSRVRVLLLGAGALGCEVARLLMTWGVRKLTVVDNGYVATPDLIKQSLYTDNDCGVP
RATAIVPHLKERCPAVEVEGIQMEIPMPGHPVSLSKVATMLDDCKRLQTLVASSDAVFLL
IDGWESRWLPTLLCANENKIAITAVLGYDSYLVMRHGAGLGTRSGGMNEMTAQIEKLSTE
DALGCQRLGCCFCNDTASVINPIPNGILDQQCAIPGLTSIASGKAVELFARMLHHPDEIH
APGDIAGTDTEHQLGILPHQLRGSLPKCVLSTELGNSSSNCTACSNAVLSEYRRRGLDFV
IEAINNPTYLKDLTGISDLKKLDACPKMPASIPVNSDKFSDVRCLLLGAGTLGCDVARIL
MDFGVRKLTMVDSGRVVVSNLARQSLYTSDDRDTPKATAILRHLQEMCPSVDAQGIQMEI
PMPGHPVSPSEAAGVLEDCKRLKELIASHDAVFLLTDTRESRWLPTLLCTDENKCLFALQ
IAITAALGYDSYLVMRHGAGPDINCEGSDVVASTDKLSTKDALGRQRLGCYFCNDVVAPV
DSVSNRTLDQQCTVTRPGLASIASGHAADLFTRMLHHPDGIHAPGEIAGTNGEHLLGLLP
HQIRGSLSQYNLLTLLGYSSSNCTSCSNAVLSEYRRRGMDFVMQVINEPTYLEDLTGLTD
LMKSAAYAQVEWLDETDEDELVTI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttcccgcggccgctgcaggtcctggccatccagagctgcgcggaggagggg
ttctgggacgcgctccgccgcctcaagctcgacgtcctcggcaccgacgactcccccgtc
cccatcaccggttattatactccacgccagaatcccaaggttgcaagcctcttaaggcta
tgcccagaatcattagtgccaccatcggcatctgataattccattggctctaggaacaat
tgcccagtcccagggaccctcataaacactaataacatgaggggattccaaaacctagat
agagaacttcttctgagagcagaagcgaagaagatcttgcatgacattatgtccggtaaa
gtagaagagaatcctgctcttctaattaggttccttgtgatatcatttgctgatctgaag
aattggaaggtatattacaatgttgcatttccctcactggttttcaactctaaaatgacc
ctgctcagcctgcaatacgcctcacaagtgctcagcaaggaagaggcagcatccttgtat
agatcattgcaagagtggcgtacttgtagtgaaacaacagtagttccattctttctgatt
agtatatcctctgatttgtctgtctctgtaagacaacttaaggactggaaagcttgccag
gggagctgtcaaaagctgctatttgggttttatgatcatggctgtcaagtgatacgctcg
ctagggcgtggcaatgccaaactagatttcccaggctgggctcttagaaactacattgca
ttcctgagcatgcggtggaagattgagaatgttcagttcttctgctaccgagaacataga
gggcaacctgatctagaacagtcctacattggtgaagcatcatttccaccaccttatggc
tgtgatgaccctgattatgtacctgaagctattggatgggaaggagaaaagcctgggaag
ggaacaaaagaaatgaaaccgaaagaaataaatcttcaatcgatgaatccggcaagtcag
gatgaagaaaaacaactgatgcatttgaagcttatggggtggcgccactttccagtgaat
atagacaagttatctcgtgttcgagttcttttgttgggtgctggagctcttggatgtgaa
gttgcccgcctacttatgacctggggtgtacgaaaactaacagtggttgacaatggttat
gttgccacgcctgatcttatcaaacaatcactctacacagacaatgactgtggagtccca
agagcgactgctatagttccacatctaaaagaaagatgtcctgcagtggaggttgaaggc
atccagatggaaataccaatgcctgggcatcctgtttctctcagcaaagtagcaactatg
cttgatgattgcaagcgtctccaaacattagtggcttccagtgacgcagtcttcttgtta
attgatgggtgggagagcaggtggcttccaactcttctctgcgcaaacgaaaacaagatt
gccattactgcagtattaggatatgacagttaccttgtcatgcgacatggtgctggtcta
ggaacaagaagtgggggtatgaatgaaatgactgctcagatagagaaattgtccacagaa
gatgctcttggctgtcaaagattgggctgttgtttctgcaatgatactgcttcagttatt
aatccaattcctaatggaatactagatcaacaatgtgcaatacctggactgacctcgatt
gcatctggcaaagcagtggagctctttgctaggatgttacaccatccagatgagatacat
gctccaggagatattgctggtacagacactgaacatcagcttggtattttgccacatcag
ctgcgaggatcactccctaagtgtgttttgtcaactgaattaggcaattcgtcaagcaat
tgtactgcatgttctaatgcagttttgtcagagtatagaagaagaggattggattttgtc
atagaggccatcaacaacccaacatatctaaaagatctaacaggcatttcggatttgaaa
aagctggatgcttgtcctaaaatgccggccagtatccctgtaaattcagacaagttttcc
gatgtccgatgtctactgttaggtgctgggactcttggatgtgatgttgctcgtattctg
atggactttggtgtacgaaagctaacaatggttgatagtggtcgtgttgttgtgtcaaat
ttggctaggcaatcactctacacatctgatgatcgtgatacccccaaagcgactgcgata
cttaggcatctacaagagatgtgtccttcggtggatgcacaaggcattcaaatggaaata
cctatgccagggcatcctgtttctcctagtgaagcagctggtgtgcttgaagattgcaag
cgccttaaggaattaatagcttcccatgatgctgtcttcttattgactgacacaagggaa
agtagatggcttccgacgctcctctgcactgatgaaaacaagtgcctctttgcactgcag
attgcgattactgcagcattagggtatgacagttaccttgtcatgcgtcatggggctggt
cctgacataaattgtgaaggttcagatgtggtcgcttccacggataagctgtccacaaag
gatgctcttggacgtcaaagactggggtgctatttctgcaatgatgttgttgctcctgtt
gattcagtctccaatcgaacactggatcaacaatgtacagtaacacgacctggtctagcc
tctattgcatctggacacgccgcagacctcttcacaagaatgttacatcatccagatggg
atacatgctccaggagagattgctggcacgaacggtgagcatctgcttggtctgttgcct
caccagatacgaggatcactctcgcagtacaacttattaacactcttgggctattcctca
agcaattgcacatcgtgttccaatgcggtattgtctgaatatcggaggagaggaatggat
tttgtgatgcaagtgatcaacgaaccaacttatttggaagacctaaccggcctgacggac
ttgatgaaatctgcagcttacgctcaggttgagtggttagatgaaaccgatgaagacgag
ttagttacgatctga
DBGET
integrated database retrieval system
