KEGG   Phragmites australis (common reed): 133907370
Entry
133907370         CDS       T10575                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
paua  Phragmites australis (common reed)
Pathway
paua00860  Porphyrin metabolism
paua00970  Aminoacyl-tRNA biosynthesis
paua01100  Metabolic pathways
paua01110  Biosynthesis of secondary metabolites
paua01240  Biosynthesis of cofactors
Module
paua_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:paua00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    133907370
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    133907370
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:paua01007]
    133907370
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paua03016]
    133907370
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:paua02048]
    133907370
Enzymes [BR:paua01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     133907370
Amino acid related enzymes [BR:paua01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   133907370
Transfer RNA biogenesis [BR:paua03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    133907370
 Prokaryotic type
   Other AARSs
    133907370
Prokaryotic defense system [BR:paua02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    133907370
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C GST_C_3 GST_C_2 tRNA-synt_1e GST_C_6 GST_C_7
Other DBs
NCBI-GeneID: 133907370
NCBI-ProteinID: XP_062205379
LinkDB
Position
24:12230985..12236152
AA seq 715 aa
MEVKLAFSQDSPPISIICAAKVADVPLTVDPSLAAGSGPTLWFDSGESLHGINPILHYIA
RGASSSSFSGQNAVEFGHVVEWLEYAPTFLSGSEFESACSFVDGYLASRTFLIGHGLTIA
DIAVWSNLAGIGQRWESLRKSKKYQDLVRWFNSIDAEYRDTLNQVVTAYVGKRGIGKSPA
PSLKEKVHDSKDPSAPEVDLPGAKVGEVCVRFAPEPSGYLHIGHAKAALLNKYFAERYQG
RLIVRFDDTNPSKESNEFVENLLNDIQTLGIRYDAVTYTSDYFPKLMEMAESLIKQGKAY
VDDTPKEQMRSERMDGIESRCRNNTVEENLSLWIEMINGTERGMQCCVRGKLDMQDPNKS
LRDPVYYRCNTDPHHRVGSKYNVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQYYRIL
QDMGVRRVEIYEFSRLNMVYTLLSKRKLLWFVQNKKVEDWTDPRFPTVQGIVRRGLKVDA
LIQFILQQGASKNLNLMEWDKLWTINKKIIDPVCARHTAVLKDQRVIFTLTNGPAKPFVR
ILPRHKKYDGAGKKATTFTNRILLDYADASAISKGEEVTLMDWGNAIIKEIKMESGVITE
LIGELHLEGSVKATKLKITWLPDIEDLVPLSLVEFDYLIRKKKLEEDEDFLDNLNPCTRL
EIPALGDPNMRNLKRGEVIQLERKGYYRCDSPFIRSSKPVVLFAIPDGRQQASLN
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggaggtgaagttagcattctcccaggacagcccaccgatttcaatcatttgtgctgct
aaggttgcagatgtccccctaacagttgatcctagtcttgctgcgggctcaggacccact
ctatggtttgattctggagaatcactccatggtatcaacccgattctccactacattgcc
cgtggtgcatcttcttccagcttttctggccagaacgctgttgaattcggacatgttgtt
gaatggcttgaatatgcccccaccttcctttcaggttctgaatttgaaagtgcctgctca
tttgttgatggatatttggcatcccggacttttctcattggtcatggtctgacaattgct
gacatagcagtgtggtcgaatcttgctggtattgggcagcgatgggaaagtctaaggaaa
tcgaagaaataccaagatcttgtccgttggttcaacagcatagatgcagagtacagggac
acactgaatcaagttgttactgcgtatgttgggaaacgaggaattggaaaatctcctgca
ccaagccttaaggaaaaggtccatgattcaaaggatccatcagcaccagaagttgatctc
cctggtgcaaaagttggggaagtttgtgttcgttttgccccagagcctagtggttacctc
catattggtcatgcaaaggctgcactattgaacaagtactttgctgaaagatatcaaggg
cgattaatagttcgatttgacgacacaaacccttcaaaggaaagcaatgagtttgtcgag
aaccttctgaatgatattcagacattgggaatcagatacgatgcagtgacatacacatct
gattattttccaaagctaatggaaatggctgaaagtttgattaaacaggggaaagcatat
gttgatgacacaccaaaggagcaaatgaggagtgagaggatggatggtattgaatcaagg
tgcagaaataatactgttgaggaaaatctgtcattgtggatagagatgattaatggaact
gaaaggggtatgcagtgctgtgtgcggggtaaacttgacatgcaggatcctaacaagtca
ctccgggatcctgtttactaccgctgcaatactgatcctcaccatcgtgttggttcaaaa
tacaatgtatacccaacgtatgactttgcttgcccatttgttgatgcattagaaggagtg
acgcatgctcttcggtccagtgaataccatgaccggaatgcacaatattatcgaattctt
caagatatgggggtgaggagagtggaaatatatgaattcagccgattgaatatggtttac
acacttctcagtaaaaggaagcttctttggttcgtacaaaacaagaaggtcgaagattgg
actgaccctcgtttccccactgttcaaggcatagtacgtcgtggcttgaaggttgacgcg
ttgatacaatttatactccaacagggtgcttcaaaaaatctcaatcttatggagtgggat
aaactctggacgatcaacaagaagataattgacccagtgtgtgcaaggcatactgctgtg
ttaaaagaccagcgtgtgatcttcacgcttactaatggtccagcaaaaccatttgttcgg
attttaccacggcacaagaaatatgatggtgctggaaagaaggctacaaccttcactaac
agaattttgctagattatgctgacgcatcagctattagtaagggtgaggaagttacccta
atggactgggggaatgctatcattaaagagatcaagatggagagtggagtaataacagaa
ctaatcggagaactgcatcttgagggctctgtgaaggcaacaaaattgaagatcacatgg
ttaccagacatagaggacctagtccccctctccttggtggaatttgattatctcataaga
aagaaaaagctggaggaggatgaggacttcctcgacaatctgaacccttgcactcgacta
gagatcccagccctcggagacccaaacatgaggaacctcaagcgtggagaggtaatacag
ctcgagaggaaaggttactacaggtgtgacagcccgtttatcaggtcctcgaaaccggtg
gttctgtttgcaatcccagacggtcgacagcaggcctcactgaactag

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