Phragmites australis (common reed): 133907522
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Entry
133907522 CDS
T10575
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133907522
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133907522
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
Motif
Other DBs
NCBI-GeneID:
133907522
NCBI-ProteinID:
XP_062205560
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Position
24:complement(8785264..8790682)
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AA seq
587 aa
AA seq
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MARMQINSKEQEVHRVARKFHELQQNEMIGSVLKQRIVDDEDYCDTTCSAGEDRYPGWPG
TSVFRILIPAQKVGAIIGHEGERVRRLCEKTKACIRIIGGHLCAAEHAVIIFAKEQPDEP
IPPALDALLRVYRQTINDDALDVGSNSIIVTRILTPSEQAESLIGEQGVMINSIMEATQT
NICVLDGDLPPVALEEDRVIEIWGLPARVHKALELVASHLRKYLVHPSVIPLFEPHVPVP
IFHMDMPPGHFIDHPEGLGHAVSPGYRSVFAEDLQREPWIDTCYLRGRHPMGNLSHADTF
EYRWEAPASFRRYRWVTSPNHGISAYGPEASSSMELGSHHNLTYGLRATPNGPPATVERI
RSLISVYGQQAHPWRQTYQSAKMGKHPHFGVSLHGSEAHPAKVSPSDATELPPTDGISAC
EREASLSFKMHAPTTVENLLHCRISACGPEAPPRVAPPSLTSQSTAVPSQVKKKMQVPIF
YAEAVIGPTGERIQYIRRASRSSILINDSEEGAMSIEISGSAATDVLTAEQLIKNFMAEG
AAASPGHSFDFIPSYLPAPRSPQADILTTSKTSGVSTLPERRLQTIY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctaggatgcagataaattcgaaggagcaagaggttcatagagtggccaggaaattt
catgagctacagcaaaatgaaatgattgggagtgttctaaaacaaagaattgttgatgac
gaagactactgtgatactacttgctctgctggtgaagacaggtatcctggttggcctgga
accagtgtcttcaggatactcattcctgcacaaaaggttggtgcgataattggtcacgaa
ggagagagggttagaagattgtgtgagaagactaaagcctgcatccgaattataggcggt
catctttgtgcagcagagcatgctgttatcatatttgcaaaggagcagcctgatgagcca
atacctccagccttggatgcactactaagagtatatcggcaaacaattaatgatgatgct
ttagatgtgggatctaatagtattattgtgacaaggattcttacaccaagtgaacaggca
gaaagccttattggcgagcagggtgtgatgataaattcaatcatggaagctactcaaacc
aacatatgtgtccttgatggtgacctgccgcctgttgcactggaagaagatagggttatt
gaaatatggggactgcctgcacgagtgcataaggctttggaacttgttgcttctcatctg
agaaagtacctggttcacccaagtgtcatcccattgttcgaacctcatgtgcctgtgcca
atcttccacatggacatgcctccaggtcacttcattgaccatcctgagggccttgggcat
gcagttagtccaggctatcgttctgtatttgctgaagatcttcagcgtgaaccatggatt
gacacttgctatttgaggggtaggcatcctatgggaaatctttcacatgctgatacattt
gaatacagatgggaagcacctgcatctttcaggagatatcgatgggttacatcaccaaac
catggtataagtgcatatgggccagaagcatcttcatctatggaattaggttcacaccac
aacctgacttatggattgcgagcaactccaaatggtccaccagctactgttgaaagaata
cgctcccttatatctgtgtatggacaacaagcacatccatggagacaaacatatcaatca
gccaaaatgggtaaacatcctcactttggagtgtctttacatggaagtgaagctcatcca
gccaaggtatctccgtcagatgctactgaactacctccaactgatggtatttctgcatgt
gaacgagaagcatcactatccttcaagatgcatgcaccaactactgttgaaaatcttctg
cactgccgcatatctgcatgtgggccagaagcaccaccacgtgtggctccgccttcatta
actagtcagtctacagcagttccttctcaggttaagaaaaagatgcaagttccaatattc
tatgctgaagctgtaattggcccaactggtgaaagaattcaatacattcgtcgtgccagc
aggtcgagcattttgataaacgactctgaggagggcgcaatgtctattgagatctctgga
agtgctgcaacagatgttctaactgcagagcagctgattaagaactttatggctgaaggg
gctgctgcgtcccctggtcacagtttcgacttcattccatcatatttgccagcacccaga
tctccccaagctgatattcttactacttccaagacaagcggagtgtccactttgccagaa
cggcgcctgcaaacaatttactga
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