Phragmites australis (common reed): 133907606
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Entry
133907606 CDS
T10575
Name
(RefSeq) peroxisome biogenesis protein 12-like
KO
K13345
peroxin-12
Organism
paua Phragmites australis (common reed)
Pathway
paua04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133907606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133907606
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
133907606
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4
NinF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
133907606
NCBI-ProteinID:
XP_062205662
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Position
24:complement(6131532..6137288)
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AA seq
394 aa
AA seq
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MLFQVGGQGARPTFFEMSAAQQLPASLRAALAYSLGVFALRRPFLHKVLDYEDEFFALLM
SVLESHSLRTTDGSFAESLYGLRRRPVKVSVKRNNPGAESSDKVYDSALRKRQKFLSVVF
LVVLPYFKSKLQSIYNKEREARLQATLWGQDDVRFDEAGFVLDQEQTSQAQSESSTGVVS
NLTRFKKNFASLIGVCYPWIHATNEGLSFAYQLLYLLDATEFYSPALHVLGLHVCRATGQ
ELMDSSSRISRIRNRELERLRGPPWLKAVQQMFLSGMYTTLDYAQTGLIAAVFFFKMMEW
WYQSAEERMSAPTVFPPPPPPPTPKVARDGIPLPPDRTLCPLCCQKHANPSVLSVSGFVF
CYSCIFKSVSQHKRCPVTLMSASVEQIRRLFHDL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccaggtgggagggcagggcgcgcggcccaccttcttcgagatgtcggccgcg
cagcagctgcccgccagcctccgcgccgcgctcgcctactcgctcggggtttttgcccta
agaaggccattcctacataaagttttggattatgaagatgaattctttgctttgttaatg
agcgtccttgagtcccacagtctacggacaacagacggatcctttgcagagtcattatat
ggtctcaggaggagacctgttaaggtttcagtaaagagaaataatcctggtgctgaatcc
agtgacaaagtctatgattctgcactaaggaagcgccagaaattcctctccgttgttttt
ttggttgttttgccatattttaagtcaaaattgcagtctatatataacaaagaaagggaa
gccaggttgcaagcaacactttggggtcaggatgatgttcgattcgatgaagctggcttt
gtattagatcaggagcagacttctcaagcacagtctgagtcctcaactggagtagtgtca
aatttgacacgttttaagaagaattttgcctcacttataggtgtttgctatccatggatt
catgcaaccaatgaaggtctctcgtttgcataccagttgttgtacttgttggatgccact
gaattttatagtccagcattgcatgtgcttgggcttcacgtttgtcgtgctactggtcaa
gagctgatggattcatcttctaggatatcaaggattagaaatcgtgaacttgagagactc
cgtggccctccatggttgaaggccgtgcaacaaatgttccttagtggtatgtacacaact
ctggattatgcacaaactggtttaattgctgcagttttctttttcaagatgatggagtgg
tggtatcaatctgctgaagaaagaatgtcagctccgactgtatttccaccgccccctcct
ccaccaactcctaaggttgccagagatggaattcccttgccacctgacaggacgctttgc
cccctatgctgtcagaagcatgctaacccctctgttctttctgtttctggttttgttttt
tgctacagctgcatatttaagtccgtctctcagcataaaaggtgtcccgtaacgctgatg
tctgcctctgttgaacaaatcaggcgtctcttccatgatttgtag
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