Phragmites australis (common reed): 133907618
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Entry
133907618 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133907618
04121 Ubiquitin system [BR:
paua04121
]
133907618
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133907618
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133907618
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133907618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Anti-TRAP
zf-RING_Vps41
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
133907618
NCBI-ProteinID:
XP_062205673
LinkDB
All DBs
Position
24:complement(4813381..4817439)
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AA seq
381 aa
AA seq
DB search
MSTPAAAYYAAAARKQYFCYQCNRTVLLAAAAAAAGELSCPDCHGDFLEEVTVPAPTIIP
LPFPFPFASTTAPASNAAPAAAGSPSLSSSSSAATSPSPSTDFSAFINSFLELGEDRIRV
GSGGSGSGSRAAAGTATPENEPEAFDPFMFFQNYIQGLMEGGANIQVLLDDASVSLGPGL
GMGRVGGASFGDYFVGPGLEQLIEQLAENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAA
EGAECAVCKEDFSPGEGAKQMPCKHIYHAECIVPWLELHNSCPICRFELPTDDPDYEGRK
TSNPQPAVGIAAAAASGSSTAGEEGREENARVVERRFNVSLPWPFSGLGGQTSQHDGNNG
GSGSNSQDSGSQDGGATSSKN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccagccgccgcctactacgctgccgctgcgcgcaagcagtacttctgctac
caatgcaaccgcaccgtcctcctcgcggcggcggcggccgccgccggggagctctcctgc
cccgactgccacggcgacttcctggaggaggtcaccgtgcccgcgcccaccatcatcccc
ctccccttcccgttccccttcgcctccaccacggcccccgcctccaacgccgcccccgcc
gccgccggttccccatccctctcctcgtcctcatccgccgcgacctccccgtccccgtcc
accgacttctccgccttcatcaatagcttcctcgaactcggcgaggaccgcatcagggtc
ggctccggcggctcgggctcgggctcgcgcgccgccgccggcacggcgacccccgagaac
gagcccgaggccttcgacccgttcatgttcttccagaactacatccagggcctcatggag
ggcggcgccaacatccaggtcctcctcgacgacgccagcgtcagtctcggccctggtctg
ggcatgggccgcgtcggcggggccagcttcggggactacttcgtcggtccgggtctcgag
caactcatcgagcagctcgccgagaacgaccccaaccgctacggcacaccgccggccgct
aagtccgccctctccacgctccccgacgtcgtcgtgacggatgccatggtcgcagcggcg
gagggcgccgagtgcgccgtctgcaaggaggatttctcacctggggagggggccaagcag
atgccctgcaagcacatctaccacgccgagtgcatcgtgccctggcttgagctccacaac
tcgtgccccatctgtcgctttgagctgcccactgatgatcctgattatgagggccggaag
acatctaatccgcagccagctgttggcattgctgctgcagctgcgtctgggagctctact
gctggtgaggaaggaagggaggagaatgcgagggtggttgagaggaggttcaacgtgtca
ttgccatggccattcagtggattgggagggcaaacatcgcagcacgatgggaacaatggg
ggaagtggcagcaactcacaggacagtggctcacaggatggaggcgcaaccagcagcaag
aattga
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integrated database retrieval system
