KEGG   Phragmites australis (common reed): 133907706
Entry
133907706         CDS       T10575                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133907706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133907706
   04131 Membrane trafficking [BR:paua04131]
    133907706
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     133907706
Membrane trafficking [BR:paua04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    133907706
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 133907706
NCBI-ProteinID: XP_062205764
LinkDB
Position
2:complement(28970692..28975679)
AA seq 323 aa
MAERQVAELGPGAACCGWNHCGRRLAAGAVDGSVSVYDSHPSPSSKWQAHEHGVVNVVWL
PPEYGDAIACVCADGTLSLWEEVAEDDQLPVWRKCKVFEGGNCHILNVQFGLHLASLKMV
TAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPVSRYGKPACISASIAWNPRRDGSQQA
SFAIGFNSDSPHFNSCKIWEFEEAHQRWLPLVELGSSEDKGDRVCAVAWAPNIGRPYEIV
AVGTCKGIAIWHIGSNPDSDSGLSAENVAVLSGHGGEVWQLEWDMGGMTLASTGGDGMVK
LWQANLDGVWHEQAVLDCSGSHN
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcggagcggcaggtggcggagctgggccccggcgcggcgtgctgcggctggaaccac
tgcggtcgccgccttgccgccggcgccgtcgacggctccgtctccgtatacgattcccac
ccgtccccttcctccaagtggcaggcccacgagcacggcgttgtgaatgttgtctggctt
cctcctgagtatggggacgctatagcttgtgtttgtgctgatgggacactgtctttgtgg
gaggaggttgctgaagatgatcaacttccagtctggaggaagtgtaaagtctttgagggg
ggcaattgtcacatactaaatgtacagtttggattgcatctggcaagtctgaaaatggtt
actgcatactcagatggccaagtgaaggtctacgagctcttggattcactggaattagac
aagtggcagcttcaggcagagttccagaacattaccgatccagtttccagatatggaaag
ccagcatgcatttctgcatcaatagcatggaatccaagaagagatggaagtcaacaggct
agttttgctattggcttcaattcagattctcctcatttcaactcttgtaagatttgggag
tttgaagaagctcatcagcgttggcttccacttgttgagcttggttcgtccgaggataag
ggagatagagtgtgtgctgtagcatgggctcctaacattggcagaccatatgaaatcgtc
gcggttggtacctgcaaaggaattgcaatatggcacataggttcgaaccctgactctgat
agcggtctttcagcagagaatgttgcggtactttctggccacggtggtgaggtatggcag
ctggaatgggacatgggcggtatgacactagcatcgactggaggcgatggcatggtgaag
ctatggcaggctaacttggatggagtttggcatgagcaagctgttcttgactgcagtgga
tcacataactag

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