Phragmites australis (common reed): 133907706
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Entry
133907706 CDS
T10575
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133907706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133907706
04131 Membrane trafficking [BR:
paua04131
]
133907706
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133907706
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
133907706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
133907706
NCBI-ProteinID:
XP_062205764
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Position
2:complement(28970692..28975679)
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AA seq
323 aa
AA seq
DB search
MAERQVAELGPGAACCGWNHCGRRLAAGAVDGSVSVYDSHPSPSSKWQAHEHGVVNVVWL
PPEYGDAIACVCADGTLSLWEEVAEDDQLPVWRKCKVFEGGNCHILNVQFGLHLASLKMV
TAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPVSRYGKPACISASIAWNPRRDGSQQA
SFAIGFNSDSPHFNSCKIWEFEEAHQRWLPLVELGSSEDKGDRVCAVAWAPNIGRPYEIV
AVGTCKGIAIWHIGSNPDSDSGLSAENVAVLSGHGGEVWQLEWDMGGMTLASTGGDGMVK
LWQANLDGVWHEQAVLDCSGSHN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaggtggcggagctgggccccggcgcggcgtgctgcggctggaaccac
tgcggtcgccgccttgccgccggcgccgtcgacggctccgtctccgtatacgattcccac
ccgtccccttcctccaagtggcaggcccacgagcacggcgttgtgaatgttgtctggctt
cctcctgagtatggggacgctatagcttgtgtttgtgctgatgggacactgtctttgtgg
gaggaggttgctgaagatgatcaacttccagtctggaggaagtgtaaagtctttgagggg
ggcaattgtcacatactaaatgtacagtttggattgcatctggcaagtctgaaaatggtt
actgcatactcagatggccaagtgaaggtctacgagctcttggattcactggaattagac
aagtggcagcttcaggcagagttccagaacattaccgatccagtttccagatatggaaag
ccagcatgcatttctgcatcaatagcatggaatccaagaagagatggaagtcaacaggct
agttttgctattggcttcaattcagattctcctcatttcaactcttgtaagatttgggag
tttgaagaagctcatcagcgttggcttccacttgttgagcttggttcgtccgaggataag
ggagatagagtgtgtgctgtagcatgggctcctaacattggcagaccatatgaaatcgtc
gcggttggtacctgcaaaggaattgcaatatggcacataggttcgaaccctgactctgat
agcggtctttcagcagagaatgttgcggtactttctggccacggtggtgaggtatggcag
ctggaatgggacatgggcggtatgacactagcatcgactggaggcgatggcatggtgaag
ctatggcaggctaacttggatggagtttggcatgagcaagctgttcttgactgcagtgga
tcacataactag
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integrated database retrieval system