Phragmites australis (common reed): 133907784
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Entry
133907784 CDS
T10575
Name
(RefSeq) tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133907784
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133907784
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133907784
03029 Mitochondrial biogenesis [BR:
paua03029
]
133907784
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
133907784
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (A)
133907784
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133907784
Prokaryotic type
133907784
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
133907784
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
133907784
NCBI-ProteinID:
XP_062205864
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Position
24:complement(5858516..5860216)
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AA seq
497 aa
AA seq
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MATAAMAAAASSRAFLRPHRPLLLLSHRRRLYATPAAAAVTEARRGVVDVLRERGLVEAT
TSEALATALPGELKVYCGFDPTAESLHLGNLLGLVALSWFRRCGHTAVALIGGATGRVGD
PSGKSAERPELDIAAVSANSDAIKSLVARILGRVPEPAHHTQSGENAALRQNEQPLPNSE
AELSEKMGSFVILDNYDWWKDITLLDFLKEVGRFARVGTMIAKESVKKRLASEDGMSYTE
FTYQLLQGYDFLHMFKNMGVNVQIGGSDQWGNITAGTELIRKILQIEGAHGLTFPLLLKS
DGTKFGKTEEGAIWLSPKMLSPYKFYQYFFAVLDVDVIRFMRILTFLSLDEIQELEESMK
KPGYVPNTVQKRLAEEVTRFVHGEEGLAEALKATEALRPGAQTQLDAQTIEGIADDVPSC
SLAYDQVLKSPLVDLAVSTGLLASKSAVRRLIKQGGLYLNNSRIDSEDKLVEEADIVDGK
VLLLSAGKKNKMVVRIS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgccatggccgcggccgcctcctcgcgggccttcctccgcccccaccgc
cccctcctcctcctctcccaccgccgccgcttatatgcgacccccgccgcggcggcggtc
acggaagcccggcgcggtgtcgtggacgtgctccgggagcgcgggctcgtggaggcgacc
acctcggaggcgctcgcgacggcgctccccggggagctcaaggtgtactgcggcttcgac
cccaccgcagagagcctgcacctcggcaacctcctcggcctcgtcgcgctctcctggttc
cgccgatgcggccacaccgccgtcgcgctcatcggcggcgccaccggccgcgtcggtgac
ccctccggcaagagcgccgagcgccccgagctggacatcgccgcagtctccgccaactcc
gacgccatcaagtccctcgtcgcccggatcctcggccgcgttcccgagccagcgcaccat
acccaatccggtgaaaacgcagctttgaggcaaaatgagcagcctttgcccaattcggaa
gcagaattgtcagagaagatgggttctttcgtgatcctggataactacgactggtggaag
gacatcacgctgctggatttcctcaaggaagtggggaggttcgcgcgtgtagggacgatg
atcgccaaggagagcgtcaagaagcggctcgcgtcggaggacggcatgagctacaccgag
ttcacctaccagctcctgcagggctacgacttcctgcacatgttcaagaacatgggtgtc
aatgtgcagatcgggggcagtgaccagtgggggaacatcacggcgggaaccgagttgatt
cggaagatcttgcaaatcgagggggcgcacggcctgacgtttccgctattgctgaagagc
gacgggaccaagtttgggaagacagaggagggcgcaatctggctctcaccgaagatgctc
tctccatacaagttctatcagtacttctttgcggtgctggatgtcgacgtcatcaggttt
atgagaatcctaacgttcctgagcttggatgagattcaggagctggaagagtctatgaag
aagcctggatatgtgccaaacacagttcagaagaggcttgcagaagaggtgacccgtttc
gtccatggcgaggaggggttggcggaggcgttgaaggcaactgaggccttgaggcctggg
gctcagacacaattggacgcacaaacaattgaggggatagcagatgatgtaccgtcatgc
tctttagcttatgatcaagtattgaaatctcccctggttgatctggctgtttcgacaggc
ttgcttgctagcaagtcggcggttaggcggctcatcaagcaaggtggtctgtacttgaat
aacagtaggattgatagcgaggataaattggttgaggaagctgatatagttgatgggaag
gtgctgctgctgtctgccggaaagaagaacaagatggttgtgaggatatcttga
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