Phragmites australis (common reed): 133907942
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Entry
133907942 CDS
T10575
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133907942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133907942
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
133907942
Complex B
133907942
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
133907942
NCBI-ProteinID:
XP_062206055
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Position
24:18763191..18768660
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AA seq
493 aa
AA seq
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MSDYGHGAPRGPNQDSRPRGQGQRPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEYKPP
LEKRKCPAYTGMAQFVSHFAEPGDPEYSPPVPKCETRSEKKARIRMNKLEQGAAKVAEEI
QKYDPQSDPNATGDPYKTLFVARLNYETPEHKIKREFEAYGPIKRVRLVTDKETSKPRGY
AFIEFMHTRDMKNAYKQADGRKVDGKRVVVDVERGRTVPNWHPRRLGGGLGSSRIGGENA
DKKDSAREQQLAVRPISEEPRRDDRRADSFRDREKSRESVRERDRDERTRERSHDRTRDR
DSREEKHHHRDRDRPRDRERGKDRERDHGRDRDRDRRDKDRDRDRGRDYDREKDRDRSHD
RHRERGKDRDKDYERASRERDRGHVHDREADYANGGPKHDKSLLHYGQDYGYSQYEQHKG
HDPYGYDQDGRGHESERSKRHEREYYRVDSYGKMETNYQGQPNNAEPDGPEEGEAYEEGA
YQYQQAGERMNET
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactacggccacggcgcgccgcgggggcccaatcaggattcccgccccaggggc
cagggccagcgccccaacgtccagcagctcaagctcatggggcagatccacccgacgggg
ctcacgccgaacctgctcaagctcttcgagccgcgaccgccgctcgagtacaagccgccg
ctcgagaagcgcaagtgcccagcgtacactgggatggcacaatttgtgtcgcacttcgcc
gagcccggggacccggagtactccccgccggtgcccaagtgcgagacaaggtctgaaaag
aaggctaggattcgcatgaataagcttgagcaaggtgcagctaaggttgctgaagaaatt
cagaaatatgacccgcaaagtgaccccaatgccactggagatccgtacaaaacactcttt
gttgcaagacttaattatgagacgcctgagcataagattaaacgggagtttgaagcttat
ggtcctattaaaagggtgcggcttgtaactgacaaggagactagtaaacctagaggatat
gcattcatcgaatttatgcacactcgggacatgaaaaatgcttacaagcaggcagatggg
agaaaagtggatggcaagagggtagtagttgatgtggagcgtggtagaactgttccaaat
tggcatcccaggagattgggtggtggacttggatcaagcaggattggtggtgagaatgct
gacaagaaggattccgctagggagcaacagcttgctgtgcgtcccatatcagaggagcct
aggagggatgatcgtcgtgctgatagcttcagggatcgggagaagtctcgtgaaagtgta
cgtgaaagagatcgtgatgagagaacccgtgaacgctcacacgaccgtacacgtgatcgt
gattcaagagaagagaagcaccaccatagagatcgtgatcggcctcgggacagggagcga
ggaaaggaccgggaaagagaccatgggcgtgaccgcgaccgtgatcgtcgtgacaaagat
agggacagggatcgtggtcgggactatgatagagagaaggaccgtgatcgttctcatgat
cgccatcgtgagaggggcaaggaccgtgacaaagattatgagcgcgccagtcgtgaacgg
gaccgtggtcacgtgcatgatagggaagctgactatgccaatggtgggccaaaacatgac
aaaagtttgttacattatgggcaggattatggctatagccaatatgagcaacacaaaggt
cacgacccctatggttatgatcaagatggacgtgggcatgaaagtgagcgctcaaagcgg
catgagcgtgagtactatcgtgttgactcgtacggtaagatggaaaccaactatcagggg
caaccaaacaatgctgaacctgatggccctgaggaaggggaggcatacgaggaaggtgcc
taccagtatcagcaagcaggtgaacgcatgaatgaaacttga
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