Phragmites australis (common reed): 133908082
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Entry
133908082 CDS
T10575
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133908082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133908082
03036 Chromosome and associated proteins [BR:
paua03036
]
133908082
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
133908082
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133908082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
133908082
NCBI-ProteinID:
XP_062206193
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All DBs
Position
24:7708939..7717069
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AA seq
337 aa
AA seq
DB search
MVPGARPSGGAANSTSTTGGSSPSDRGGAAPSVSASTPASESTVARRLNGLDIQADDAPS
SQPAASKKKKRGSRAVGPDKNGRGLRQFSMRVCEKVESKGRTTYNEVADELVAEFTDPNN
NIDSPDPDNPSAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPQTSMNDVEEL
KKEIIGMKGRIDKKSAYLQDLQDQYVSLQNLVQRNEQLYGSGDAPSGGVSLPFILVQTRP
HATVEVEISEDMQLVHFDFNSTPFELQDDSFVLKAMGLSGKEETDGAQAPVANGGECSST
PNNYWHQSPQPARPRGVRLPTSPPIPGILKGRVKHEH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtccccggcgcccggccctccggcggcgcggccaactccacctccaccaccggcggc
agctccccttccgaccggggcggcgccgcgccctcggtctcggcctcgacgccggccagt
gagagcaccgtcgcccgccgcctcaacggcctcgacatccaggccgatgatgcaccctcc
tcgcagcccgccgccagcaagaagaaaaagagaggttcacgtgcagttggtcctgacaaa
aatggccgtggattgcgccaattcagcatgagagtctgtgagaaagtcgaaagcaaaggg
agaacaacctacaacgaggtggcagatgaactggttgctgaatttacagaccccaataat
aatattgactctccagatcctgataatccctctgcgcaacaatatgatgagaaaaatatt
cgaagaagagtgtatgatgcactgaatgtcctaatggctatggagattatatctaaagat
aaaaaggaaatacaatggaaaggcttgcctcagacaagtatgaatgatgttgaagaattg
aagaaagagatcattggaatgaaaggtcggattgacaagaaaagtgcatatttgcaggat
ttacaagatcaatatgtaagtctccaaaacttggtacaacgaaatgagcagctatatggg
tcaggagatgcaccttctggtggagtgtccttgccattcatactagtacagacacgtcct
catgcaacagtagaagtggagatatcagaagatatgcagttggtgcattttgacttcaat
agcactccatttgagttgcaggatgattcctttgtattgaaagcaatggggttatctggt
aaagaagaaactgatggcgcccaagctccagttgcaaatggaggtgagtgctcaagtaca
ccgaacaattattggcatcaatcacctcaacctgcgaggccaagaggagttcggctacca
acctcgcctcctattccagggatactaaaagggcgcgtcaagcatgaacactaa
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