Phragmites australis (common reed): 133908268
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Entry
133908268 CDS
T10575
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
paua
Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133908268
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
133908268
REST complex
133908268
Heterochromatin formation proteins
Other heterochromatin formation proteins
133908268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
DUF1722
Pre-PUA
Motif
Other DBs
NCBI-GeneID:
133908268
NCBI-ProteinID:
XP_062206253
LinkDB
All DBs
Position
1:8842720..8851899
Genome browser
AA seq
1439 aa
AA seq
DB search
MKRARDDALMGSQLKRPNLARSDPAAQPQHMPLPGSASAAAPPPAAAQPAQQPSAGATAS
YSASQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNG
YPDLILGFNAFLPKGYAIKLQEEKKPVDFVEAINFVNKIKSRFQHDEHVYKAFLDILNMY
RKDNKSIQDVYHEVAMLFSDHKDLLEEFQHFLPDTSVAPQPVASRGGLVKRDDRSSLMPP
ASRTPHNDKRYMLHADRDFSVDRPDVEHDRQKRRLDKEKERKVDRDRRDYEREDKDVDNE
SRELDVGQRKRKPFPRKLEETTGAETHQGAPTENHRIHSVSASSYDDKDALKSVYTQEFH
FCEKVKEKLEHEAYQEFLKCLHIYSQEIITRSELKNLVNDILQQYPDLMDGFNEFLEHCE
NIDGFLAGVFNKRQTAKTVKTEDKEKDREREREDKDRDREKERERPEKGSTFNPKEGACH
KPSVYPPGKEKYNLSKPISELDLSNCQRCSPSYRLLPKIYPMPPASNRTDLGASVLNDHW
VSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSV
KPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSRC
RSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLTEIKEINEKKRKEDDVLLA
IAAGNRRPIVPNMSFEYIDSKIHEDLHKIIKYSCGEICNSSDQLDKVMRIWTTFLEPILG
VQPRIHGAEDLDLVKPKSRTTKSGLASVAESNTGAGVVAKQGHGDESVLHEQGPSSRSRL
VNGIAADTQNGFHDADRTARRSEEPSNAALNGRVHGAVSAADDMLALSTQNMSTERSSEN
AAVVRAEQHKANSELTPGVNASRSSHDGVETAGEARACNETLSSAEGGETGRSGSSLNGG
CTNEGNKVRLNNEGSAPHNTSKVEREEGELSPNGDFEEDNFVPFEDGSSKAKEGSTSRPF
QGRPGEVVPSCAEAAGENDADADDEGEESAQRSTEDSENASEAGEDASGSESGDGEECSR
EDHDEEEEDMDHDDQDAKAESEGEAEGTTETHDVEGGISLPLSERFLYAVKPLAKHVPTA
LHDRDEKSSRIFYGNDSFYVLFRLHQILYERLLSAKTNSFNAEKKWRTSKDTNPPDLYAK
FTSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKLL
QLYLYEKSRSPGRFFDLVYHENARVLLHDESIYRFECCSNPTRLSIQLMEYGHEKPEVTA
VSIDPNFSSYLFSEYLSSMSDKKLSEGVFLVRNKRKHSNNDEPSDSLKAMDGIKVVNGLE
CKISCKTSKVSYVLDTEDFLFRLQKRRKLLHGGNVPDRLQVSKIYAAKVQRFNRFLSKP
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccagggacgacgcgctcatggggtcacagctcaaacgccccaacctcgcc
cgatccgatccggcggcgcagccgcagcacatgcccctgccgggctcagcgtcggcggca
gcgccaccacctgcggctgcccagccggcgcagcagccgtccgccggtgccacggccagc
tactcggccagccagaagctgactaccaacgatgcgctcgtctacctcaaggcggtgaag
gataagttccaggacaagcgggagaagtatgaggagttccttgaggtcatgcgtgacttc
aagagcgagaggattgatacaaatggagtgattattcgtgtgaaaacactgttcaacggg
taccctgatctgatccttgggttcaatgctttcttgcccaagggctatgcgatcaaacta
caggaggagaagaagcctgtcgattttgtggaagctatcaatttcgtgaacaagataaag
agtcggttccagcacgatgagcatgtctacaaggcattcttggacatactcaacatgtat
cgcaaggataataagtccatccaagacgtttaccatgaggttgcgatgctgttcagtgac
cataaagatttactggaagaattccagcactttttgcctgatacctcagtggctccacaa
ccagtggcctcaaggggtggtttggttaagcgggacgacaggagctctctaatgcctcct
gccagtaggactcctcacaatgataagaggtatatgttgcatgctgaccgtgactttagt
gtcgatcgtcctgatgtggagcatgatcgccagaaaagacgtcttgataaggaaaaagaa
cggaaggtggacagggatagaagagattatgagagagaagacaaggatgttgataatgag
agcagagagctggatgttggacagcgtaagcgcaaaccttttccaaggaagctggaggaa
acgacaggtgctgagacacaccaaggagcccccactgagaatcatagaatacatagcgta
tccgcttcatcatatgacgataaggatgcactgaagagtgtatacacacaggaattccat
ttctgcgagaaagtgaaggagaagctggaacatgaagcttaccaggagtttttgaaatgt
ctgcatatatacagccaagagattattacaagaagtgaattgaagaacttggtgaatgat
atacttcagcaatatccagatctcatggatgggttcaacgaattcttagagcattgtgaa
aatatagatggatttctggctggagtcttcaataaaaggcaaactgcaaagactgttaaa
actgaggacaaagaaaaagatagagagcgggagagggaggataaggacagagatcgggaa
aaggaaagagagagacctgagaaaggatcaacattcaatccgaaggaaggtgcttgccac
aaaccttctgtgtacccacctggcaaagagaagtataacctatccaaaccaatatcagag
cttgatctctcaaactgtcaacgatgcagtccaagttaccggcttctaccgaaaatttat
cccatgccccctgcaagcaacaggactgatcttggagcctctgttcttaatgatcactgg
gtatcagtgacatcgggaagtgaagattattcgtttaagcacatgcggaagaatcagtat
gaagaaagcttatttagatgcgaagatgacaggtttgagctggatatgctgttggaatca
gttaatgcagcaactaagcgtgttgaagagttgatagaaaagatgcaagacaactcagta
aaacctgatagccctattcgcattgatgaacatttaactcctttgaatctgaggtgcatt
gaacgattatatggtgatcatggtctggatgtgatggatgttcttcgcaaaaatgctagt
gttgcgttgccagttatcttaaccaggctcaaacaaaagcaagaagagtggtcaaggtgc
cgatcagatttcaataaagtttgggctgaaatatatgccaagaattatcacaagtcactt
gaccatcgtagtttctatttcaagcagcaagatacgaagaacctgagcacaaaatcgcta
ctgactgagattaaagaaattaatgagaagaaaaggaaggaggatgatgtactccttgct
attgctgctggaaataggcggcctatagttcccaatatgtcatttgagtatatagattcc
aaaatccatgaagatctacataagatcattaagtactcctgtggcgaaatctgcaattct
tcggatcaactagacaaagtgatgagaatatggacaacttttctggagccaattttgggt
gttcagcctcgaatccatggtgccgaggatctggacctagttaagcccaagagccgaaca
acaaaatctggtcttgcaagtgttgcggaaagcaatactggagcaggggttgttgccaag
caaggccatggtgatgaaagcgttctgcatgaacaaggaccatcttctcggtctagattg
gtgaatggaattgcagcagatactcaaaatggtttccatgatgccgatcgaactgcccgt
agaagtgaggaaccatcaaatgctgcactaaatggaagagtgcatggtgctgtctctgcc
gcagatgacatgctggccctaagtacccaaaacatgtctaccgagcgatcatcagagaac
gctgctgttgttagggctgaacaacataaggcgaattcggaactcacaccaggtgtgaat
gcttctagaagttctcacgacggagttgagacggctggtgaagccagagcttgcaatgaa
acattgtcttctgcagagggtggggagacagggaggtcaggatcatctttaaatggtgga
tgcaccaatgagggaaataaagtccgcctaaataatgaaggttctgcaccccataatact
tcaaaagttgaaagagaagagggtgaattatcgcctaatggagattttgaagaggacaat
tttgtcccttttgaagatggatcatctaaagcaaaggaaggttctacaagcagaccattc
cagggtaggcctggggaagtggtaccatcttgcgctgaggcagctggtgagaatgacgct
gatgctgatgatgagggtgaggaaagtgctcagagatctactgaggacagtgaaaatgcc
tctgaggctggtgaagatgcatcgggcagtgaatctggtgatggtgaggaatgctctcgt
gaagaccatgatgaggaagaggaggatatggatcacgatgatcaggatgcaaaggccgaa
agtgagggtgaggcagaaggaacaactgagacacatgatgtggaaggaggaatatcacta
ccgctttcagaacgctttctgtatgcagtaaaaccacttgccaagcatgtacctacagct
ttacatgatagagatgagaagtcctcccgtatattttatgggaatgattcgttttatgtc
ttgttcaggctacaccagatcttatatgagagactactttcagcaaagacaaactctttt
aatgctgaaaagaaatggagaacttccaaggatacaaaccctcctgacctatatgcgaag
tttacgagtgcgctgtacaacttgcttgatggttcgtctgacaataccaagtttgaggac
gactgccgagctattattggaactcaatcatatgttctctttactttagataaactgatt
tacaaagtcgtgaaacagcttcaagctatagcgacagacgaaatggacaataagcttctg
caactatatttatatgaaaaatcaaggtctcctgggaggttctttgatctagtttatcat
gaaaatgcccgtgtcctcctccatgatgagagcatatatcgatttgaatgttgctcaaat
ccgacaaggttgtctattcagctgatggaatatggtcatgaaaagccagaagtgaccgca
gtatcaattgatccaaatttttcttcgtacctttttagtgagtatttgtctagtatgtca
gacaagaaattatctgaaggcgtcttccttgtaaggaacaagcggaaacattcaaataat
gacgagccttcagattctttgaaggctatggatggtatcaaagttgtaaacggtcttgaa
tgcaagatatcatgcaagacctctaaggtatcatatgtccttgacaccgaagatttcttg
tttcggttacagaagaggaggaaacttttacatggtgggaatgtgcctgacaggttgcag
gtttcgaaaatatatgctgcaaaagtgcagcgcttcaatagattcctatccaaaccttag
DBGET
integrated database retrieval system
