Phragmites australis (common reed): 133908444
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Entry
133908444 CDS
T10575
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133908444
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GFIT
Motif
Pfam:
PMI1_PMIR1-2_C
Motif
Other DBs
NCBI-GeneID:
133908444
NCBI-ProteinID:
XP_062206500
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Position
1:complement(1170828..1180010)
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AA seq
1180 aa
AA seq
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MSASNEKWIDGLQFSSLFWPPPHDVQQKQAQILAYVEYFGQFTADSEQFPEDVAQLIQSC
YPSKEKRLVDEVLATFVLHHPEHGHAVVHPILSRIIDGTLCYDRHGSPFSSFISLFSQTS
EKEYSEQWALACGEILRVLTHYNRPIFKVERQNSEAECRHTSDEATSSDSSEKKSNNSPG
NESDRKPLRPLSFWITDILLAAPLGIRSDYFRWCGGVMGKYAAGGELKPPTTAFSRGSGK
HPQLMPSTPRWAVANGAGVILSVCDEEVARYETANLTAAAVPALLLPPPTTPLDEHLVAG
LPPLEPYARLFHRYYAIATPSATQRLLFGLLEAPPSWAPDALDAAVQLVELLRAAEDYAT
GMRLPKNWMHLHFLRAIGTAMSMRAGIAADTAAALLFRILSQPTLLFPPLRHAEGVEVHH
EPLGGYVSSYKRQLEVPASEATIDATAQGIASMLCAHGPDVEWRICTIWEAAYGLLPLSS
SAVDLPEIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRIFVATVEAILRRTF
PTETSEQSRKPKSQSKNLAVAELRTMIHSLFVESCASMDLASRLLFVVLTVCVSHQALPG
GSKRPTGSDNHSSEEISEDGRNRCKKKQGPVATFDSYVLAAVCALSCELQLFPFISKNGT
HSNSKNGTHSNSKNGTHSNSKNGTHSNLKDSIKIIIPGKTNGISNELHNSISSAILHTRR
ILGILEALFSLKPSSVGTSWSYSSNEIVAAAMVAAHVSELFRRSRPCLNALSALKKCKWD
AEISNRASSLYHLIDLHGKTVSSIVNKAEPLEVHLTLAPVKKDDQHHREENNSSSLDCGK
MENENASTSHKKNGSARPLLKCADEVLLNGDVASTSGKAIASLQVEASDLANFLTMDRNG
GYRGSQTLLRSVLSEKQELCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDV
VSASPAKASTAIVLQAEKDLQPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALVI
LASSSDLLLRATDGILVDGEACTLPQLELLEVTARAVHLIIKWGDSGVAVADGLSNLLKC
RLSTTIRCLSHPSAHVRALSMSVLRDILNNGPTNSSTSSQGEHRNGMQSTSYQCLAASII
NWQADVERCIEWEAHSRRATGLTLAFLGTAAKELGCPLPC
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcaaatgagaagtggattgatgggcttcagttctcatcactgttctggccc
ccaccgcatgatgtgcaacagaagcaggcacaaattttggcatatgttgagtactttggc
cagtttacagctgacagcgagcaattccctgaagatgtagcgcagctcattcaaagttgc
tatccatcaaaagaaaaacgcttggtagatgaagtattggcaacttttgtccttcatcat
cccgagcatggtcatgcagttgtacatccgattctttcacgtatcatagatgggaccctg
tgctatgacaggcatggttccccattcagctccttcatctctttatttagtcagacttct
gagaaagagtactcggagcaatgggccttggcctgtggagaaattcttagagttctaact
cactacaataggccaatattcaaagttgagcgccaaaatagtgaagctgaatgcaggcac
acgtctgatgaggctacatcaagtgattcctcagagaagaaatctaacaattctccagga
aatgaatctgaccggaagccattacggccactctctttttggatcacggacatattgcta
gccgcacctttgggtattagaagtgactattttagatggtgtggtggagttatgggaaaa
tatgctgctggtggagaattgaagcctccaacaactgctttcagtcgaggatctgggaag
cacccacaacttatgccatccacccccagatgggctgttgccaatggagctggagttata
ttaagtgtctgtgatgaggaggtagctcgttatgagacagccaatttaactgcagcagct
gttcctgcactgctgctacctccacctacaacacccttggatgagcatttggttgctggt
ctgccccctcttgaaccatatgctcgcttattccatagatactatgcaattgctacgcca
agtgctacacagaggttgcttttcggtcttctcgaagcgccaccatcatgggctccagat
gcacttgatgcagcagtacaacttgttgaactccttagagcagctgaagattatgctacc
ggcatgcggcttccaaagaactggatgcatctacatttcttgcgtgcgattggtacggca
atgtcaatgagagctggtattgctgctgatacagctgctgctctgcttttccgtatactc
tctcaaccaacgttgctttttccaccactgagacatgctgaaggagtcgaagtacatcat
gaaccactgggtggctatgtgtcatcatataagaggcagttggaagttcctgcatctgaa
gccactattgatgccacggcacaaggcattgcttccatgctgtgcgctcatggccctgat
gttgagtggagaatatgtaccatctgggaagctgcctatggtttgctacctctgagttcg
tcagcagttgatttacccgaaattgttgtagccgctccccttcagccacctacactgtca
tggagcctatacttgccattattaaaagtatttgagtatctacctcgtggaagtccatct
gaagcatgcctgatgaggatatttgtggcaacagttgaagctatactcagaagaactttt
cctacagaaacctcggaacaatccagaaaaccaaaaagtcagtcaaagaaccttgctgtt
gctgaactccgcacaatgatacattcactctttgttgaatcctgcgcctcaatggacctt
gcctcccggttgttgtttgtggtattaactgtttgcgtcagtcatcaagctttgcctggg
ggcagcaaaagaccaactggtagtgataaccattcctctgaggaaatcagtgaggatgga
agaaacagatgtaagaagaaacaaggacctgttgctacatttgactcgtatgttttagcc
gcagtttgtgccttatcttgtgagcttcagctgttccctttcatttccaagaatggaaca
cattcaaattccaagaacggaacacattcaaattccaagaacggaacacattcaaattcc
aagaatggaacacattcaaatttaaaggactctataaagattatcatacctggaaaaacc
aatgggataagtaatgagctgcacaatagcatcagctcagcaattcttcatactcgcaga
atacttggcatattggaagctcttttctccttgaagccatcatcagttggtacctcatgg
agctatagttcaaatgaaatagttgcagcagctatggttgctgctcacgtttctgagtta
tttcgtcggtccaggccgtgcctaaatgcactctctgcactgaagaaatgcaagtgggat
gccgagatttcaaacagggcatcatccctttaccatttgattgacttgcatggtaaaaca
gtgtcctccattgtgaacaaagctgagcctcttgaagttcacctgacccttgcaccagta
aagaaggatgatcaacaccacagagaggaaaacaatagcagctcattggattgtggcaag
atggaaaacgagaatgcttcaacctcccataagaaaaacggatctgcaagaccactcttg
aaatgtgcagatgaggttctactaaatggtgatgttgcaagtacatctggaaaagctatt
gcaagtttacaagtggaagcatctgatttggcaaacttccttaccatggatcggaatggt
ggttaccgaggttctcaaactctcctaaggtctgttttgtcagagaaacaagagctatgc
ttctctgttgtctcgttgctctggcagaagctcattgcatctcctgaaatgcagatgtct
gcagaaagtacatcagctcaccaaggttggagaaaggttgtagatgcgctttgtgatgtc
gtttcagcctcaccggccaaggcttcgactgccattgttctccaggcagaaaaagacttg
cagccttggatcgctcgagatgatgagcaaggtcagaagatgtggagagtcaaccagcga
atagtgaagctgattgctgagcttatgagaaaccatgatagcccagaagcactggtaatt
cttgctagttcttcagacctactacttcgggctactgatggaatactcgttgatggtgaa
gcttgtactttgccgcaactagagcttcttgaagtgaccgctagagcagttcatctcatt
atcaaatggggagactcaggtgtagcagttgctgatggcctctctaatctgctgaagtgc
cgtctatcaactaccatccgctgcctctcgcaccctagtgcacatgtgcgcgcgctcagc
atgtccgtccttcgcgacatcttgaacaatggacccacaaactccagcacgagcagtcaa
ggagaacaccggaatggcatgcagagcacgtcctaccagtgccttgcagctagcatcatc
aactggcaagcggacgtcgagaggtgcatagagtgggaagcccacagccgccgcgccacc
gggctgacgctcgccttcctcggcacggctgcaaaggaactcggctgccccctcccttgt
tga
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