Phragmites australis (common reed): 133908547
Help
Entry
133908547 CDS
T10575
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133908547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133908547
04147 Exosome [BR:
paua04147
]
133908547
04090 CD molecules [BR:
paua04090
]
133908547
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133908547
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133908547
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133908547
CD molecules [BR:
paua04090
]
Proteins
133908547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_24
AAA_15
DUF87
AAA_30
AAA_7
DLIC
AAA_25
Motif
Other DBs
NCBI-GeneID:
133908547
NCBI-ProteinID:
XP_062206605
LinkDB
All DBs
Position
2:35391331..35398062
Genome browser
AA seq
1264 aa
AA seq
DB search
MDAAEAAKRRDGEVKKENGGGEDAGKVSFVGLFRYADGTDVLLMLVGSAAAMANGVSQPL
MTVIFGQIINAFGGATTSDDVLPRVNQAVLNFVYLGIGTAVVSFLQVACWTMTGERQATH
IRSMYLKSVLRQDIAFFDVEMTTGQVVTRMSGDTVLVQDAIGEKVGKFLQLIATFIGGFV
IAFVKGWLLSLVMLACIPPVVIAGAVVSKMLSKISSKGQASYSDAGNVVEQTLGAIKTVV
SFNGEKQAIAMYNKLIHKAYKAAVHEGVTNGFGMGSVFFIFFSSYGLAIWYGGKLILSRG
YSGGDIINILFAVMTGAMSLGNATPCMAAFAEGQSAAYRLFTTIKRKPEIDPDDPTGKQL
EDVKGDVDLKGVYFSYPARPDQLIFDGFSLHVSSGTTMAIVGESGSGKSTVISLVQRFYD
PQAGEVLIDGINIKSLQLDWIRGKTGLVSQEPLLFMTSIKDNITYGKEDATIEEIRRAAE
LANAANFIDKLPDGYDTMVGQRGAQLSGGQKQRIAIARAIIKNPRILLLDEATSALDVES
ERIVQEALNRIMVNRTTLVVAHRLSTVRNADCISVVQQGKIVEQGPHDELVMNPDGAYSQ
LIRLQENQEEEQKLERHMSDSRSKSRSLSLKRSISRGSAGNSSRHSLTLPFGLPGSVELL
EGNDANGENQKEQDRDGEVPKKVPMGRLASLNKPEIPILLLGSLAAGVHGVLFPMFGLMI
SNAIKTFYEPADKLRKDSSFWGLMCVVLGVASIISVPVEYFLFGVAGGKLIERIRALSFR
SIVHQEVAWFDDPRNSSGTLGARLSLDALNVRRLVGDNLALALQVTSTLITGFVIAFVAD
WKLTLIILCVMPLSGLQGYAQIKFLKGFSQDAKTLYEDASQVATDAVGSIRTVASFCAEK
RVTAMYDNKCEASKNQGVRTGVVGGLGFGFSFLMLYLTYGLCFYVGAQFVRQNKSTFGDV
FKVFFALMLATIGISQTSALASDSTKAKDSAISIFALLDRKSEINSGSDEGLTLDEVKGD
IDFQHVSFKYPSRPDVQIFSDFSLHIPSGKTVALVGESGSGKSTVISLLERFYNPDSGTI
SLDGVEIKSLKVNWLRDQMGLVGQEPVLFNDTIRANIAYGKHGEVTEEELIKVAKAANAH
EFISSLPQGYDTTVGERGVQLSGGQKQRVAIARAILKDPKILLLDEATSALDAESERIVQ
DALDHVMVGRTTVIVAHRLSTIKGADIIAVLKEGAIVEKGRHDALINIKGGVYASLVELR
LASS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagcggaagctgcgaaaaggagggatggcgaggtgaagaaggagaacggcggc
ggcgaagacgccgggaaggtgtcgttcgtggggctgttccggtacgccgacggcacggac
gtgctgctgatgctggtcggctcggcggcggcgatggccaacggcgtgtcgcagccgctc
atgacggtcatcttcggccagatcatcaacgccttcggcggcgccaccaccagcgacgac
gtcctcccccgcgtcaaccaggcagttctgaactttgtctacctgggcattggaacagcg
gttgtttcctttcttcaggtggcatgttggacaatgacaggagaaaggcaggcgacacac
attcgatctatgtacctcaaatctgtcttgagacaagatatagcattctttgatgtcgaa
atgacaactggacaagtagttacaagaatgtctggtgataccgtgctagttcaggatgcc
attggtgagaaggtcggcaaatttctacaacttatagctaccttcatcggtggtttcgta
atagcatttgtaaaaggatggcttctatctcttgtcatgttggcatgcatacctccagtt
gtcatcgctggtgcagtagtctcaaaaatgctgtctaaaatctctagcaaggggcaagca
tcatacagtgatgcagggaatgttgtcgaacagacacttggggccataaaaacagttgtc
tccttcaacggtgagaagcaggccattgcaatgtataataaactcatacacaaggcatac
aaggctgctgttcatgaaggagttaccaatggttttggcatgggttctgttttcttcata
tttttctctagctatggtttagccatatggtacggcggcaagttgattcttagccgagga
tactcaggaggagacataatcaatatcttgtttgctgtcatgactggggcaatgtcttta
ggcaacgcaacaccctgcatggcagcctttgcagaaggacaatctgcggcatacagatta
ttcacaacaatcaagcggaaaccagagattgatcctgacgacccaactggtaagcagtta
gaagacgtcaagggtgatgttgacctaaagggcgtgtacttcagctacccagcaaggccg
gaccaactgatatttgatggattctcattacatgtatcaagcggcactacaatggctata
gttggggagagtggaagtggcaagtcaactgtgattagtcttgtacagagattctatgac
ccacaggctggtgaggttttgattgatgggattaacatcaagagtttgcagcttgactgg
ataagagggaagaccggtcttgttagccaagagccattgctctttatgacatctatcaaa
gataacataacatatggcaaagaggatgcaacgattgaagagatcagaagagcagctgag
cttgctaatgcagctaatttcattgataaattgcccgatggctatgacacgatggttggg
caacgtggtgctcagctctcagggggacaaaagcaaaggattgctattgcaagagcaatc
attaaaaaccccagaatccttttgttagatgaggctaccagtgcgttggatgtggagtca
gagcggattgttcaggaggcactgaacaggataatggtaaacagaacaacactagttgtt
gcacatcgcctgagtactgtgaggaatgctgattgcatatcagttgtacaacaaggaaaa
atagttgaacaaggtcctcatgatgaattggtaatgaaccctgatggtgcttattctcaa
cttattcggctacaagaaaaccaagaagaagaacagaaattagaacgtcacatgtctgat
tcaaggtctaaaagtagaagcctctcgttgaagcgatcgataagcagaggttctgcagga
aacagtagtaggcactctttgaccctcccctttggcttgcctggctcagttgaattgctc
gaaggcaatgatgcaaatggggagaatcagaaagaacaggatcgtgatggtgaggtccca
aagaaagttcctatgggacggctagctagtcttaacaaaccagagataccgattcttttg
ctaggatcactagctgctggagtccatggagtgcttttcccaatgtttggtctaatgatt
tccaatgccatcaaaactttctacgagccggcagacaaactaagaaaggattctagcttt
tggggtttgatgtgtgttgtgctgggtgtcgcatcaataatatcagtaccagtggagtat
ttcttgtttggagtagccggagggaagcttatcgagcgtattcgtgccttgtcatttcgg
agcattgtgcaccaagaagttgcttggttcgatgatcccagaaattccagtggaacactt
ggtgcaaggttgtcacttgatgccttgaacgtccgacgtttagtgggtgataatttggcc
ttggcacttcaggtcacctcgacactaatcacgggatttgtcattgcatttgtagcagac
tggaagctcacactgatcatcctctgcgtgatgccactatcaggacttcaaggttatgca
caaataaagttcttgaaggggttcagtcaagatgccaagacattgtatgaagatgcaagt
caagtggccactgatgcagtcggtagtatcagaactgtagcttctttttgtgctgagaaa
agagtgacggcaatgtacgataataaatgcgaagcctcaaagaatcaaggggtcagaaca
ggagtggttggaggccttggttttggtttctcattcttgatgttgtaccttacttacggt
ctttgtttctatgttggagcgcaatttgtgcgtcaaaacaaatctactttcggagacgtt
ttcaaggttttctttgcgctgatgttggcaacaattggaatatctcaaacaagtgcatta
gcgtctgattctacaaaggccaaggattcagctatctccatatttgctttgttggaccga
aagtcagaaatcaactcaggcagtgatgaaggcttgacattagatgaggtcaagggcgac
atcgatttccaacatgtcagcttcaagtatccaagccgcccagatgtacaaatattcagc
gattttagcctgcacattccctctggcaagactgttgcacttgtgggagagagtggcagc
ggcaagtcgacagtaatctctttgttggaacgattctacaatcccgactctggtacaatc
tcactggatggtgtggagatcaagagcctaaaagtcaattggctcagggaccaaatggga
ctggtgggccaagagcctgtgctcttcaacgacacaatccgtgccaacatagcctacggg
aagcatggggaggtcaccgaggaggagctcatcaaggttgcaaaggcggccaatgcgcat
gagttcatatcaagccttccccagggatatgacaccaccgttggggagaggggagtccag
ctatccggtgggcagaagcagcgggtggctattgcaagggccatactgaaagaccctaag
atcctactgctcgatgaagcgacgagcgcattggatgccgagtctgagcgcatcgtgcag
gatgccttggatcatgtgatggttggcaggaccacggttatcgtggcgcaccgcctctcg
acaatcaaaggtgccgatatcatcgcagttctcaaggagggtgcgatagtggagaaaggg
agacatgatgcgctgataaacatcaaaggcggagtctacgcttcgctagtcgagcttcgt
ttggcctcctcatag
DBGET
integrated database retrieval system
