Phragmites australis (common reed): 133908585
Help
Entry
133908585 CDS
T10575
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133908585
03083 Polycomb repressive complex
133908585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133908585
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
133908585
Histone modification proteins
HAT complexes
HATB complex
133908585
HDAC complexes
Sin3A-HDAC complex
133908585
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
133908585
PRC2.2
133908585
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
133908585
Heterochromatin formation proteins
Other heterochromatin formation proteins
133908585
Chromatin remodeling factors
NuRD complex
133908585
NuRF complex
133908585
NuRF complex (fruit fly)
133908585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
133908585
NCBI-ProteinID:
XP_062206664
LinkDB
All DBs
Position
2:36201482..36207412
Genome browser
AA seq
456 aa
AA seq
DB search
MKERGSSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYL
SEQTDGSMPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIVHPGEVNRIREL
PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGATESRPDLILTGHQENAEFALAMCPAEP
YVLSGGKDKSVVLWSIQDHISALGDSSKTEASPGASGSKQSGKTANEKDSPKVDPRGVFH
GHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTGPAVKVEKAHSGDVHCVDWNPLD
VNYILTGSADNSVRMWDRRNLGTGGAGSPIHKFEGHKAAVLCVQWSPDKASVFGSSAEDG
FLNVWDHEKVGKKKNTNSPAALFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGG
TLQIWRMSDLIYRPEEEVLTELENFKSHLASCTPRT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaggggttcgtcgagggcggcggtggacgagcgctacgcgcagtggaagtcg
ctcatcccagtcctctacgactggttcgccaaccacaacctcgtctggccgtccctctcc
tgccggtggggtccgcagtttgagaaagctacctacaagaatcgtcagcgcctttaccta
tctgagcagactgatgggagcatgcctaatactctggtcatcgcaaattgtgaagtcgtc
aaaccaagggttgcagctgcggagcatatctcgcagtttaatgaggaagcacgatcacct
tttgtgaagaagtataagactatagttcatccgggcgaggttaacagaatcagggagctt
ccgcagaacagtaagatcatagccactcacaccgacagtccagatgtacttatttgggat
gttgaggcccaaccaaacagacatgctgtccttggagcaactgaatctcgccctgatttg
attttaacgggacatcaggaaaatgctgaatttgcgcttgccatgtgtccggcagaacca
tatgtactatctggaggaaaggacaagtctgtcgtcctgtggagcatccaagaccacata
tctgcccttggggattcctcaaaaacagaggcttcccctggagcatcaggcagcaagcag
tctggtaaaactgcaaatgaaaaggatagtcctaaagtcgatcctcgaggtgtattccat
ggccatgacagcactgttgaagatgttcagttctgcccttctagcgcacaggagttctgt
agtgtgggtgatgatgcttgtcttattctctgggatgctcggactggtactggcccagct
gttaaggttgagaaagcacacagtggagacgttcattgtgttgattggaacccccttgat
gttaactatatcttaaccggttctgctgataactctgtccgtatgtgggatcggcgaaat
ctgggtactggaggagctggttcaccaattcacaaatttgagggtcataaagctgctgtt
ctttgtgttcagtggtcacctgacaaagcatctgtttttggaagctctgcggaagatggt
ttcttaaatgtttgggatcatgagaaggtcggaaagaagaaaaatacaaattcaccagct
gcgcttttctttcaacatgctggtcatagggataagattgtagacttccactggaattca
tcggatccttggacgattgtgagtgtctctgatgatggtgagagcactggtggaggtgga
acattgcagatatggcgcatgagtgatttgatctaccgcccagaggaggaagttcttacg
gagctggagaatttcaaatctcacttggccagctgcactccgaggacttga
DBGET
integrated database retrieval system
