Phragmites australis (common reed): 133908770
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Entry
133908770 CDS
T10575
Name
(RefSeq) RING-H2 finger protein ATL39-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133908770
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133908770
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
133908770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-C3HC4_3
zf_RING_Vps8
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
133908770
NCBI-ProteinID:
XP_062206908
LinkDB
All DBs
Position
2:39206608..39207701
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AA seq
234 aa
AA seq
DB search
MSGIGKASDPGSAWFGGGGSGRSPSAGLGHNVRFVTAAVAAFVSVLGLALFLHLYVCHVR
RRNRRRGASAAAVLPTTAAAAPKGGLDPSAIAVLPTAAYGKEVGGDAGGCTECTICLGVM
QEGEAVRVLPACGHVFHVPCVDLWLASSSSCPVCRAGVEPPPPCSAGWVQGKLQDAEKEE
AGSSAPARGIGASLMKMLSRERPSPRRPQGADADAGELYDLERQQPQPQHAVDN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggattgggaaggcgagcgacccggggtcagcgtggttcggcggcggcggcagc
ggccgaagcccgtcggctgggctgggccacaacgtgcggttcgtcaccgccgcagtcgcc
gcgttcgtgtccgtgctcggcctcgcgctcttcctgcacctctatgtctgccacgtccgc
cgccggaaccggcggcgcggggccagcgcggcggccgtgcttccgaccaccgcggccgcg
gccccgaagggcgggctggatccctcggccatcgcagtgctgccgaccgcggcgtacggg
aaggaggtgggcggcgacgcgggcggctgcaccgagtgcaccatctgcctcggcgtcatg
caggaaggggaggcggtgcgggtgctgcccgcctgcggccacgtgttccacgtcccctgc
gtcgacctctggctcgcgtccagctcgtcgtgcccggtctgccgcgccggggtggagccg
ccgccgccgtgctcggcggggtgggtgcaggggaagctgcaggacgcggagaaagaggag
gcgggcagttcggcgccggcgcgggggatcggtgcgtcgctgatgaagatgctgagcagg
gaaaggccgtcgccacggaggccacagggcgccgacgccgacgccggggagttgtacgac
ttggagcggcagcaaccgcagccgcagcacgctgtggataattag
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