KEGG   Phragmites australis (common reed): 133908868
Entry
133908868         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133908868
  KO
K24739  WD repeat-containing protein 13
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:paua04990]
    133908868
Domain-containing proteins not elsewhere classified [BR:paua04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   133908868
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 WD40_Gbeta Beta-prop_Vps41 Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_like Beta-prop_TEP1_C Beta-prop_RIG_1st KNTC1_N Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_SPT8 CPSF_A
Other DBs
NCBI-GeneID: 133908868
NCBI-ProteinID: XP_062207045
LinkDB
Position
2:complement(40635783..40640042)
AA seq 519 aa
MAGTTTRPTARDPRPPPRPASPLISPGGARQRHTHVAGETEPMAAADSASSSSSPECPAT
PSRPTDPDFLSCVLQPTTPSSSSRPDADYAALRRLLLRRKPSSALQHRMEWRCNGKGYVA
YRYLLLRRIDGGSAHSTPSNSGRWAPSPGPATFSEADSWSSTRDWRSNSGVLSHTISISS
KQSDPERHVRFAEPAYSFVGMHCIFDNCKASVTILKFGHASSDLLAYGAADGSLTVCQVS
EPPSVLQKLTGHSKDITDFDFSSNNQYIASCSMDKTVRVWEISKGTCIRVVYGVSSQLCI
CFHPVNNNLLLVGNTNREINAINFSTGRVISKLTFDDAITALDIDHTGQLIFAGDAQGFI
YTVSVNSHTGSLSRTHKNKSSKSKSPITTIQYRTFSLVARYPVLLSCAQDGNLSFFSIAT
DAKGYLTLICSLKLASRVQRIRACFCPLLSLEKGEFIVTGSEDANVYFYDLARPKNTCVN
KLQGHGSPVIGVAWNHGENLLASSDLDGTVIVWKRAKTS
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggccggtactacgacccgaccgactgcccgagatccaaggcccccgccgcgccccgcc
tcgcccctgatctctcccgggggcgcgcgccaacggcacacgcacgtggccggcgagacg
gagccgatggccgccgctgactctgcctcctcctcctcctccccggagtgccccgccacc
ccctccaggcccacggaccccgacttcctcagctgcgtcctccagcccacgaccccctcc
tcctcatcccgccccgacgccgactacgccgccctccggcgcctcctcctgcgccgcaag
ccctcctccgccctccagcaccgcatggagtggcggtgcaacggcaagggctacgtcgcc
taccgctacctcctactccgacgcatcgacggcggcagcgcccacagcacgcccagcaac
agtggaaggtgggctccctctcctggccctgctacattctctgaggcagacagctggagt
tctacccgggactggagaagtaatagtggtgtgttaagccacaccataagtatcagctca
aagcagagtgatcctgagcgccatgtcagattcgccgagcctgcatactcatttgttgga
atgcattgcatctttgacaactgcaaagcctcagttacgatattgaaatttggccatgcg
agttctgatctacttgcgtatggtgcggcagatggcagtttgacagtctgccaggtttcc
gagccaccatctgttcttcaaaaattgacaggacattctaaagatatcacagattttgat
ttttcatctaataaccagtacatagcttcatgctccatggataaaactgtgcgagtatgg
gagatctctaaaggcacctgtatcagggttgtatatggagtttcttcccagctatgcatc
tgctttcatcctgtgaataataatttgcttctagttggcaacacaaacagggaaatcaat
gcaataaattttagcactgggagagtaatcagcaaacttacctttgatgatgcgattaca
gctttggatattgatcacactgggcagcttattttcgctggtgatgcacagggtttcata
tatactgttagtgtgaattcacatacagggtcgttatctagaactcacaagaacaagagc
agtaagagcaaatctcctattactaccatccagtatcgcaccttctctctggtagcacgt
tatccagtacttctttcttgtgcacaagatggaaacctgtctttcttcagcattgcaaca
gatgctaagggatacttgaccctcatatgctccctaaaattggcctcgcgagtgcagagg
atccgtgcttgtttctgtccgcttctttcccttgagaaaggagagttcatagttactggt
agcgaggacgcaaatgtttacttctatgatttggcacgcccaaagaacacatgtgtgaat
aaactacagggacatggttctccagtaattggagtggcctggaatcatggggaaaatttg
ctggcctcatccgatttggacggtacagttattgtatggaagcgagcaaaaactagttag

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