KEGG   Phragmites australis (common reed): 133908879
Entry
133908879         CDS       T10575                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:paua04812]
    133908879
Cytoskeleton proteins [BR:paua04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     133908879
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st eIF2A Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_LRRK2 Lactonase WD40_like
Other DBs
NCBI-GeneID: 133908879
NCBI-ProteinID: XP_062207073
LinkDB
Position
2:40884571..40892775
AA seq 833 aa
MDSEKRGYKLQEFVAHDAEVRSLAIGKKSSRVFITGGNDRKVNLWAIGKQTPLLSLSGHT
SSVEAVQFDSAEVLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTAIEFHPFGEFFASG
SSDTDLKIWDIKKKGCIHTYKGHRGAIRKIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLH
EFKFHSGQIHCIDFHPHEFLLATGSADRTVKFWDLETFEMIGSAGPEGTGVRSMVFHPDG
KTLFCGIDQSLKVFSWEPVRCHDIVDMGWSNLADLSIYEGKLLGCSYHERRVGLWVADIS
LIGPYALGVVPKAISFAELVHSMDDNPAKSIDSTANSSPVLAMTHPKTSYKVKESGIAES
RVRGSHLTPASTDKIKKDRSSTIPRRPDSSLKSSIQSATPMRRMKLVGSPSTNPKTVEHN
FGQRDISLTSRTGIANNTSTAKKGHFTESALVKDIYTTSLAVSAPVVVPRDILEDKTVDS
ACRGTEGTATLPDDFRDSVRTRKFSPSGAGAADSDSPARSTEPDVCSEGLSGLKFSFGLT
PYYKKEEYGDADKEHIAQIAEKMDKTVLLEHALQSNDDKSFESPCSTTETARVKYVRGVA
VPLGKTKSLVERWEKRETSSIDYSPQTGSCGDRALRNDSPPSHLAEPSQAYEKDLSTVNE
VMTPINLTGNHDEFINAVKLRLTKLEMMRHAFEQSGIKGAIAAMTKMPDNAVQADVVSAL
KGKLDLFNLEIFSSFMPVLAGLLSSKTERHATVSLEMLLDLIKIFGPVIHSTLSANSGVG
VDIQAEQRLQRCTRCFNHLQKIQQVLHPLTMRGGQAARLAQELSLSLQDLVVI
NT seq 2502 nt   +upstreamnt  +downstreamnt
atggactccgagaagcgcggctacaagctccaggagtttgtagcacacgatgctgaagtc
aggtccctggccattggcaagaagtcgagtcgggtgtttatcactggcggcaatgatcgc
aaggtcaacctgtgggctattggaaagcaaacaccgcttctgagcttgtcaggccacaca
agctccgtggaagcagtgcagtttgattcagcagaggtgcttgtgcttgctggctcatca
aatggttccatcaagctctgggacttggaggaagctaaagttgtgcgatctctgactggg
catagatcaagttgtactgctattgaattccatccattcggcgagttttttgcatctggt
tcgtcagatacagatcttaagatatgggatataaagaaaaaaggatgcattcacacatat
aagggtcacagaggagcaattagaaaaatcaggtttacccctgatggacgatgggttgtc
accggaggggaagataacattgtgaaggtgtgggatctgacagctggaaagcttctacat
gagttcaagtttcacagcggacaaatccactgcattgattttcatcctcatgaatttttg
cttgcaacaggctcagctgatcggacggtgaaattttgggatcttgaaacttttgaaatg
atagggtctgctggacctgagggtaccggtgtacgttctatggtctttcacccagatggt
aaaacacttttctgtggaatagaccaaagcttaaaggtattctcttgggaaccagtaaga
tgccatgacatagttgacatggggtggagcaatttggctgaccttagtatttatgaaggg
aaactcttgggatgttcctaccatgaacgccgtgttggtctatgggttgctgatatatca
ctcattggaccatatgctcttggtgttgtgcccaaagcgattagttttgctgagcttgtg
cattctatggacgataatcctgcaaaatcaattgatagcactgcaaattccagtcctgtg
ttagcaatgacgcatccaaaaacttcatacaaagtcaaggagtcaggaattgctgaaagc
agagttcgtggctcacatttgactccagcaagtacagataagatcaagaaagataggagc
agtaccattccacgaagacctgattcatctctcaaatcatctattcagagtgctactcca
atgaggcgtatgaaacttgtcggtagtccttccaccaatccaaaaacagtggaacacaat
tttggacagagggatatctcactaacatctcgtacaggaatagctaataatacttcaact
gctaagaaaggccattttacagagtcagcattagtgaaagatatttacaccacgtcgctg
gctgtttctgcacctgttgttgtacccagagacattttagaggacaaaacagtagacagt
gcttgtagaggaactgaaggcacagctacactcccagatgattttcgagattctgttcgc
acaagaaaattctcacctagtggtgctggtgctgctgatagtgatagcccagcaagatca
actgaacctgatgtttgctcagagggtttgtctggcttaaaattctcctttggactaact
ccatattacaagaaagaagaatatggcgatgcggataaagaacatattgcacaaatagca
gaaaagatggacaaaacagtgttgctggagcatgctctgcagtcaaatgatgataagtcc
tttgaatcaccatgctcaacgacagaaacagccagggtcaaatatgtcagaggagttgct
gtgccactgggaaaaacaaagtctcttgttgagaggtgggaaaagagagagacttctagc
attgattactcaccacaaactggttcttgtggcgaccgggcactgagaaatgacagccct
ccatcccatttggcagaaccaagtcaggcatatgaaaaggacttgtcaacagtgaatgag
gtgatgactcctatcaatttaacggggaaccatgatgaattcataaatgctgtaaaactt
cggctgacaaaactagagatgatgcggcatgcctttgagcaaagtggtatcaaaggagca
attgctgcaatgacaaagatgcctgacaatgctgtgcaagctgatgttgttagcgctctc
aaagggaagcttgatcttttcaacctggagattttctcaagctttatgcctgttcttgca
gggttactgagcagcaagactgaaaggcatgctacggtttctttggaaatgctgttggac
cttataaagatttttggaccagttattcattcaacattatcagcaaattcaggtgttgga
gttgatattcaggctgaacagaggttgcagcgttgcacacggtgttttaaccatttacag
aagattcaacaagttctacatccattgactatgcggggtggccaagcagcgcgacttgct
caagaactaagtctttctttgcaagacttggtggtaatctaa

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