Phragmites australis (common reed): 133909192
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Entry
133909192 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133909192
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
SGT1
HEF_HK
COG3_N
Motif
Other DBs
NCBI-GeneID:
133909192
NCBI-ProteinID:
XP_062207495
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All DBs
Position
2:complement(45151227..45157538)
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AA seq
753 aa
AA seq
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MATSFGFGGSAAAGSTASSPFSFSQPAAASSPAPAPAFGSSLFSASSTPAFGSALFGASS
ASASASASTAAASPFGFGSTGFSFGQSTAAATSAASAPSLFGATVASSAGTTPSLFGAAP
SAASTASLFGASATGSAATTPGLFGATSAAATTPGLFGATSSVATTPGLSGATFSAATTP
NLFGATSAAATTPSLFGATATAASTPSPFSGAATGFSFGSSASGSTATTTAASTPSFGFS
FSSGAAASTTPSTPTSAPALGFGAATGSSLFGSTTSAPLFSSSTASSLATVGTTTPSFGF
SSVPATTISAPAFGFTPSSTSTTTVNTAPALFSAASSAPAFSLSKSTSATPATPASGPFT
GFSLATSQAAAAPSLFPSTSAAGSSSASTLGFSFGSSSAASIPTFASVSATGASTSPSAT
AAPATSGSLFSAASTGGFSFTAAPSSSSAAAATATTTTVTSVSTSAGMTTTATGTTGFPS
FSLQATTPASTSTPTTQSALSFGVSTRAASTSATSTSTSQATSSAVQASSTGPSTTAITP
AASQAPKLPSEIVGKSVEEIIRDWNNELQDRTAKFRKHATAITEWDRRILQNRNVLIRLE
AEVANVVDTQTSLERQLELIETHQREVDKALQGMEEEAERIFQDERVLLREDEAASARDA
MYEQAEVVEHELQHITEQVKSIIQTMNSTQGGELETADSMTPFDVAVRILDNQLRSLMWI
DEKVNEFSGRIQRLPNNSASVERDSGIPRFWLS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttcggtttcggcggctccgcggctgcgggctccaccgcctcctccccc
ttctccttctcccagccggccgcggcctcctcccccgcccccgcccccgccttcggctcc
tccctcttctccgcttcttccactcccgctttcggctccgccctattcggggcctcgtcc
gcctccgcctccgcctccgcatccaccgccgccgcctcccctttcggcttcggatccacc
ggtttctcgttcggtcagtccaccgcagccgccacctcggccgcgtccgcgccatccctc
ttcggcgcaacggtcgcatcctccgccggaaccacacctagcttattcggcgccgccccc
tctgccgcgagcacagctagcctcttcggcgcgtccgccaccggctctgcggcgaccacc
ccgggcctattcggcgccacctccgccgccgcgaccaccccgggcctattcggcgcgact
tcctctgtggcgactaccccgggcctatcgggcgcgactttctccgcggcgactaccccg
aacctattcggagcaacctccgccgcggcgacgacacctagtctgttcggcgccaccgcc
accgctgcgtccacgccaagccccttctctggcgccgccacaggattcagctttggctca
tcggcgtccggctccaccgctaccacgaccgctgcctcgacaccatcattcggcttctcg
ttcagctcgggagccgccgcgtcgaccaccccctccacccctacttctgcaccggctcta
gggtttggggccgccactggctcgtcgctgtttggatccaccacctccgcgccactcttc
agcagcagcaccgcctcatctctagcaactgttgggaccaccacgccatcatttggcttc
tcatccgtgccagcaacaacaatctctgccccggcgtttggctttacgccgtcatcaacg
agcacaacgacggtgaacacggctcctgctttgttctcggctgcttcctcggcccctgcc
ttctccttatctaagagcacatcggccactcctgccacaccagcgtccgggcccttcact
ggcttctccttggccacctcgcaggctgcagctgcgccctcactgttccctagtaccagc
gcagctggtagctcgtctgctagcacgcttggcttctcgtttggttcttcttcagcagct
tctataccaacatttgcttctgtttctgcgactggtgcatccacttcaccatcagctact
gcagcccctgcaacatcggggtcattgttctcagctgcttctactggtggattcagtttt
acagcagcaccatcatcgtcatcagcagcggcagctacagccactaccaccactgtcaca
agtgtgtctacatctgcaggcatgacgaccacggcaactggaactacagggtttcctagt
tttagtctgcaagcaactacaccagcttctacatcaactcccacaactcagtcagcactg
tcatttggtgtttctactagagctgctagcacatcagccactagcaccagcacaagtcag
gcaacttcctcagctgttcaagctagcagcacaggtccttctactacagctatcactcca
gcagcgtcccaagcacctaagctaccatcagaaattgttggtaaaagtgtcgaggagatt
attagggactggaacaatgagcttcaagaccgtactgcgaaattcaggaaacatgccact
gcaataactgaatgggacaggagaattctgcaaaacaggaatgttcttataaggcttgag
gctgaggtggctaacgttgttgacacacaaacaagcttggagcggcaacttgagttgata
gaaactcatcagcgagaggtagacaaggctctgcagggcatggaggaggaagctgaacgc
atattccaggatgaacgggtgttacttcgtgaagatgaagctgcttcagcacgagatgca
atgtatgaacaagcagaagttgtggagcatgaattgcaacatattacagaacaagtaaaa
tccatcattcagacaatgaattctactcagggtggtgagcttgagactgctgatagtatg
acaccatttgatgttgctgtccggatactggataatcaacttcgttctctgatgtggatt
gatgagaaggttaacgagttctctggcagaatacagaggttgcctaacaatagcgcttca
gttgaacgagactccggaattccgagattttggttaagctga
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