Phragmites australis (common reed): 133909196
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Entry
133909196 CDS
T10575
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133909196
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133909196
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133909196
Protein phosphatases and associated proteins [BR:
paua01009
]
HAD phosphatases
Fcp/Scp phosphatases
133909196
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133909196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Ribosomal_S5
DSRM_2
Motif
Other DBs
NCBI-GeneID:
133909196
NCBI-ProteinID:
XP_062207498
LinkDB
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Position
2:complement(45172757..45182635)
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AA seq
767 aa
AA seq
DB search
MAAPRPPPLAALGGGGGGGGAAPAVGAPAGVSMRMFHGDVFLGEAEVFPMKQGPEGGLPF
PSNEIRISHLSPASERCPPLAILQTIAPFSVRCKLQAKAIPPHPSLQCLYLTCFNEYKSA
VVVVGDEELHLVAMPTRAEKVPCFWCCSARAGLYAASVGMLNLRCLAIVFDLDETLIVAN
TMKSFEDRIEVLSRRMDVEDDPVRVAGMSAEIKRYIEDKELLKEFIDMDTVTDNGRIVGT
QKEEVQPLSAGQERVLRPVIRLPERNAILTRINPEIRDTSVFVKLRPAWEDLRSYLTAKG
RKRFEVYVCTMAERDYALEMWRLLDPEGNLISSQQISERVVCVKSGFKKSLLNVFRDRGC
HPKMAMVIDDRLQVWDDKDQPRVHVVPAYSPYYAPQAEMANAVPVLCVARNVACNVRGGF
FREFDENLLRKVFELVYENELLDLPYAPDVGDYLVCEDTNFIPSNKDVAPVPEGMGGAEV
EKRLNGLSYLGDQREGRQVSSSTRSSYTSYPFDDEGMAIRRTGGGRNIQPNGGSLAITPS
VFVTVLQEIARLCDSKVEFRTTVSNGKSMQFSVEVLFSNEKIGIGIGKTRDEAQVQAAEK
ALQNLESSYLAFVAPTAGVPNKGARKSPASGNGFLEDVTCSEVDISMQEPSGSTLKQDHS
NNLDKLSSVMSLIREHCLEDQNVVFRDQVRNSCSARIEEYHFQVELAGQILGRGVGLDRD
VAKLLRFAHSLEQKENGWNCNGDNFHWCLYLWSAIDIPRAAGHVFEQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcctcgccctccgccgctggcggccctgggaggcgggggcggcggtggcggt
gccgcccccgccgtcggagcgcccgctggggtctccatgcggatgttccacggcgacgtg
ttcctcggggaggcggaggtgttcccgatgaagcaggggcccgaggggggcctccctttc
ccgagcaacgagatccgcatcagtcacctctcgccggcgagcgagaggtgcccgccgctc
gccatccttcagaccatcgcgcccttctccgtgcgatgcaagcttcaggccaaggcgata
cctccgcacccaagcctccagtgcctgtacctcacttgcttcaacgagtacaagagcgca
gtagtagtggttggagatgaggagctgcaccttgtggcaatgccgaccagggcagagaaa
gtgccatgcttctggtgctgctctgcacgcgctgggctctatgcagcgtcagttgggatg
ctcaacctgcgctgccttgccattgtgtttgatcttgatgagaccctcattgttgcgaac
acaatgaagtcctttgaggaccggattgaggtgctttcccgcaggatggatgttgaggat
gatcctgtcagagtagcagggatgtctgcagaaatcaagcggtacattgaggacaaggag
ctgctcaaggagttcattgacatggatactgttacagacaatggcagaatcgttggaacc
cagaaggaggaggttcaacctctctctgctggccaggagcgtgttctccgtcctgttatc
aggctgcctgaaaggaatgcaattttgactcgcatcaatccagagattcgcgataccagt
gtttttgtaaaactaaggcctgcttgggaggatttgagaagttacctaactgccaaggga
cgcaaaaggtttgaggtctacgtatgtactatggctgagagagactatgctcttgagatg
tggagacttcttgatccagaaggcaacttgataagttcgcagcagatttcagaacgtgta
gtatgtgtgaagtcaggtttcaaaaagtctctgctgaatgtttttcgagatcgaggatgc
catccaaagatggccatggtcattgatgatcggcttcaagtttgggatgataaagatcag
cctagagttcatgttgtccctgcatattctccatactatgccccacaagctgagatggca
aatgctgttccggtgctttgtgttgcaaggaatgttgcttgcaatgttcgtggtggcttt
ttcagagaatttgatgaaaatctattaaggaaagtgtttgaactagtgtatgaaaatgag
ttattggatcttccatatgctccagatgttggtgactacttagtctgtgaggatactaat
tttataccgagcaataaagatgttgcccctgtacctgagggcatgggaggagctgaagtg
gagaagagattgaatgggctgtcatatctgggagaccaaagggaaggacgacaagtatca
tcctcaacccgttcatcatatacatcttatccatttgatgatgaaggaatggcaatccga
agaactggaggaggtaggaatatccagcccaatgggggctcactggcaataaccccctca
gtatttgtcacggtgttacaagaaattgcacgactatgtgactccaaggtggaattcaga
actactgtaagcaatgggaaaagtatgcaattttctgtggaggttctgtttagtaatgaa
aaaattggaatcggcattggaaaaacaagagatgaagcccaagtacaagctgctgaaaag
gcactccaaaatttggagagcagttacttggcattcgttgctcctactgccggagttcct
aataaaggcgcaaggaagtcccctgcaagcggaaatggctttctggaggatgttacttgt
tcagaggttgatatatctatgcaagaaccttctggaagtacattgaaacaggaccattca
aataatttggataagttgtcttctgttatgagtctcatcagggaacattgcttggaggac
cagaatgtagtatttcgtgatcaagttcggaattcttgctcagccagaattgaagaatat
cactttcaggttgaactagcaggacagattcttgggaggggcgttggtttggacagagat
gttgcaaagcttctgagatttgcacattctctggaacagaaagaaaacggatggaactgc
aatggagataactttcattggtgcttgtatctttggagtgcaattgatattcctcgggcg
gctggacatgtgtttgaacaataa
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