Phragmites australis (common reed): 133909341
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Entry
133909341 CDS
T10575
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133909341
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP100
133909341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
MCM
AAA_22
Mg_chelatase
RuvB_N
Sigma54_activat
AAA_7
Sigma54_activ_2
AAA_16
AAA_14
ABC_tran
T2SSE
IstB_IS21
DEAD
AAA_18
AAA_28
nSTAND3
AAA_8
AAA_3
AAA_29
Terminase_6N
AAA_24
TsaE
TIP49
RNA_helicase
ResIII
NACHT
Motif
Other DBs
NCBI-GeneID:
133909341
NCBI-ProteinID:
XP_062207715
LinkDB
All DBs
Position
2:complement(47130421..47136051)
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AA seq
614 aa
AA seq
DB search
MFRTFSKIREAAAPLAASAVRRCSGGSRIRAEANCPPCAAHMSVQFSLHQLPAPPQAAAV
GIDGPQHHNHDGAGVCPACRAAFLFRANRIDPLRGAFLEIPGGIAGEEEDDERVGFADRI
KRMLSERPPDEFPPLPPPPMPMPHHPPRRRSSRRRMRDEGSGGGGNGNGGESSGGEGTSA
APKREWWGGASLGEELPTPREMCRRIDEFVIGQAKAKKVLSVAVYNHYKRIYNATVHKES
AANSRFPDAAHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQA
GYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDVSGEGVQQAL
LKILEGTVVSIPEKGSRKNSRNESIQIDTTDILFICGGAFVDLEKTISERCQDSSIGFGA
PIRTNMRSSGVSNPMVTSSLLESVESGDLVRYGLIPEFIGRLPILVSLAALNEDQLVQVL
TEPNNSLSRQYRKMFNLNKVRLHFTDGALRLIAKKAIAKSTGARGLRAILESILLEAMYE
IPDEKTGNERVDAVVVDEEAFGSVDRAGCGAKILRGDGALEQYITRTNMMNLRETNDGLA
GELEEAYMSRIVSL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaccttctcgaagattcgggaggcggcagcgccgctcgccgcctcggcagtt
cggagatgctccggtggcagccggatccgggccgaggccaattgtccgccctgtgctgcc
cacatgtccgtccaattctccctccaccagctcccagcgcccccgcaggccgctgcggta
ggcatcgatggcccccaacatcacaaccacgatggggccggcgtgtgcccggcgtgccgc
gcggcgttcctgttccgcgccaaccggatcgacccgctgcgcggcgcgttcctcgagatc
cccggcggcatcgcgggcgaggaagaggacgatgagagggtgggattcgccgatcggatc
aagaggatgttatcggagcgcccgccggacgagttccccccgttgccgcctcccccgatg
ccgatgccacaccatccgccgcgacggagatcgagtaggaggagaatgagggacgaggga
agtggaggcggcggcaacggtaacggcggagaatcctctggaggggagggtacgagcgct
gcgcctaagagagagtggtggggtggggcgagcctgggcgaggagctgccgacgcctcgg
gagatgtgccgtaggattgacgagttcgtcatcgggcaggcgaaggctaaaaaggtgcta
tcggtagctgtatacaaccattacaagagaatatataatgcaactgtacataaagaatct
gctgccaattccaggtttcctgatgctgcacatgatgatcaaaatattgtagaaatagat
aaaagcaatgtactcctaatgggcccaactggctcaggaaaaacattgcttgcgaaaaca
ttagcacgtattgtaaatgtaccatttgttatagctgatgcgacatcgttaacacaggct
ggatatgtaggggaggatgtagagtcaatactgcagaagttactagtggctgctgagtat
aatgttcaagctgcacagcaagggatagtgtacatagatgaaatagataaaataacaaaa
aaggcagagagtgcaaatgttagtagagatgtatctggtgaaggtgttcaacaagcattg
ttgaaaatcctagaaggaactgttgtcagcattcctgagaaaggatctcgtaagaattct
cgcaatgaaagtatacagatagacacgacagatattctttttatatgtggtggtgctttt
gtagacttggaaaagactatttctgaaaggtgccaagattcatctataggatttggggca
cccattcgtacaaatatgagaagttctggtgtgagcaatccaatggtcacttcatcttta
ttagaatctgttgagagtggtgatcttgtaagatacgggctaataccagagttcattgga
cgtttgcccattctagtaagtttggcagctctgaatgaagatcagctcgttcaggttctt
acagaaccgaataattctctttccagacagtacaggaaaatgtttaacctgaacaaagtt
aggctgcacttcactgatggtgcactgagattgatagctaagaaggcgatagctaaaagt
actggtgcacgtggtttacgagccatcttggaaagcattctattggaggccatgtatgag
atcccagacgagaagacaggaaatgagagagtagatgctgttgtggtagatgaggaggca
tttggttctgttgatagggccggatgcggtgctaaaattcttcggggagacggtgcactg
gagcagtacataacaagaactaatatgatgaatttgcgggaaactaatgatggtttggcc
ggggagctcgaggaagcgtacatgtccagaattgttagcttgtaa
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