Phragmites australis (common reed): 133909368
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Entry
133909368 CDS
T10575
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133909368
03036 Chromosome and associated proteins [BR:
paua03036
]
133909368
Transcription factors [BR:
paua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
133909368
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
133909368
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Nop14
HMG_box_5
YL1
Motif
Other DBs
NCBI-GeneID:
133909368
NCBI-ProteinID:
XP_062207794
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Position
1:1316445..1322843
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AA seq
637 aa
AA seq
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MTDGHHFNNILLGGRGGTNSGQFKVHSGGLAWKRQGGGKTIEIDKADVTSVTWMKVPRAY
QLGVRIKEGLFYRFIGFREQDVSSLTNFIQKNMGISPDEKQLSVNGHNWGGIDIDGSMLS
FMVSSKQAFEVSLADVAQTQMQGKTDVLLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTIVVITLDPPIRKGQTLYPHIVIQFETEAVVERNLALSR
ELLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKHLKIMNLGDGQGTSGGVTDVLRDTDDDAVDPHLERIRNQAGDEES
DEEDEDFVADKDDSGSPTDDSGEEESDASDSGGEKEKSSKKEASSSKPPQKRKPKGRDEE
GSEKKRPKKKKDPNAPKRAMTPFMYFSMAERANMKNSNPDLPTTEIAKKLGEMWQKMSSE
EKQPYILQSQVDKKRYEKESAVYRGAAPVVDSGDESD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccatcacttcaataacattctcctcggcggccgcggtggaacgaactct
ggtcagttcaaagtgcattctggagggcttgcatggaagaggcaaggtggagggaagacc
attgagattgataaagctgatgtaacctcagttacatggatgaaagtacccagggcatat
cagcttggagtcaggatcaaagaaggcctcttctacaggtttattggcttccgtgaacag
gatgtaagcagcttgaccaacttcatacaaaagaatatgggcatctcaccagatgaaaaa
cagctttctgttaatggccacaattggggagggattgatatagatggaagcatgctttca
tttatggttagttcaaagcaagcatttgaagtgtctctagcagatgtcgcacaaacccag
atgcaagggaaaacagatgttctcttagagtttcacgttgatgatactactggagctaat
gagaaagattcgctcatggatttaagttttcatgtgcctacttcaaatactcagtttgtt
ggggatgagaatcgccctccggcccacattttatgggagactatattgaaatttgctgat
gttggttcctctgaagagccagttgtaacctttgaaggaattgcgattcttacaccaaga
ggacgatatagtgttgagcttcatctgtcatttctacgactccaaggacaagctaatgat
tttaaaatccaatacagcagcatcgttcgcctctttcttttgccaaagtcaaacaatccc
catactattgttgttatcactcttgatccaccaatccgtaaaggacaaacattgtatcct
cacattgttattcagtttgagacagaggcagtagttgaaagaaacctggcattgagtaga
gagcttctagctgaaaaatacaaagacaggctggaggaatcttacaagggtctaatacat
gaggtatttaccaaagtccttcgtggtctatctggtgctaaagtcacaaggcctggttct
ttcagaagttgccaagatggatacgcagttaaatcttcactcaaagctgaagatggactg
ttgtatccacttgaaaagggtttcttcttcctgccaaagcctcctacactcattctgcat
gaggagattgagtttgttgaatttgaacgtcatggcgctgggggtgccagtatatcatct
cactatttcgatctccttgtcaaactgaaaaatgaccaagaacatctcttcagaaatatt
caaaggaatgaataccacaacctcttcaacttcatcaatggaaagcacttgaaaataatg
aaccttggagatggtcaaggtacaagtggtggagttacagatgttctacgggacactgat
gatgatgctgttgacccacatctcgagcgtatcagaaatcaggctggtgatgaggaaagt
gatgaagaggatgaagattttgttgcggataaggatgacagtggatctcctactgatgat
tctggtgaggaggaatcagatgctagtgatagtggtggtgaaaaagagaaatcatccaaa
aaggaagcaagcagttcaaagccacctcagaaaaggaagcctaagggcagggacgaggaa
ggttcagagaagaaaaggcccaagaagaaaaaggatcctaatgctcccaaaagagcaatg
acaccattcatgtatttctcaatggctgagcgagcaaacatgaagaacagcaatccagat
ttgcctacaacagagattgcaaagaagcttggggagatgtggcaaaagatgtcatccgaa
gagaaacagccttatatcctgcagtctcaagtcgacaagaaacgctatgaaaaggaatct
gctgtctatcgcggtgctgccccagttgtggattccggcgacgagtctgactag
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