Phragmites australis (common reed): 133909502
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Entry
133909502 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133909502
KO
K15559
regulator of Ty1 transposition protein 103
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133909502
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133909502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
PspA_IM30
FliD_C
TEX13
Motif
Other DBs
NCBI-GeneID:
133909502
NCBI-ProteinID:
XP_062207942
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Position
2:complement(49329712..49339790)
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AA seq
518 aa
AA seq
DB search
MSAGFNRQILAQKLEKLNSSQQSIETLSHWCVFHHRYCRQVVETWDCEFRSAPCERRVSL
LYLANDIMQNSRKEGSGYITEFMRVIPAALNEVFTNGDDFGRNVVKRLVDIWEDRRIFDI
QGQSLKDDFFRRLKDLRNKLKKPGGELLEKVASSYKHVLNIDEDTLIRKCQAAFSTFDNL
NKAYGNNPYLGSRNESGFAEELQEQHSIIKNSIEQLKTSESLRATLISHLKEALNEQELK
VEQVRRQLQAAQSRYKKADELCQELGIDVESYQPSSQGLKKSSLPEMPVAFASDSANAGS
PRKGQSSAVMYSQEGDVGERSAAAANAVTKFSSDAASEEILGGVLSSRANGGNILQKTEE
YSSVNKRQKLEDGPYISQPQSQPPLPPPPPPFPHPDTFQPPPPPEYPPSPEPSPPPPPPS
APPQIIPPPPPTSTPPHIISPVPPIAGPFVPFPVGPPGPMTGVPYGTFPSYTPVVNFPMM
MPPGFPGGPNPPPAFQGLEGTFYGPPPYPAAPPPTDRK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggtttcaacaggcagatcttggctcagaagcttgaaaagcttaatagctca
caacagagtatagagactttgtcacactggtgtgtctttcatcatcgctactgccgacaa
gttgttgaaacatgggactgcgagttccgctcagctccttgtgagaggagggtatctttg
ctgtaccttgcgaatgacattatgcagaatagcagaaaggaaggtagtggatatataact
gaattcatgagggtcatccctgctgccttgaatgaagtgttcaccaacggcgatgatttt
gggcggaatgttgtaaaaagattggttgatatatgggaagatcgtagaatatttgatatt
caaggacaaagtctcaaggatgacttttttagaaggttaaaggacctcagaaacaagttg
aaaaaacctggtggagagctgctggagaaggttgcctctagctacaagcatgtgctgaat
atagatgaggacactctaatacgaaaatgccaagctgcttttagcacttttgacaatctc
aacaaagcgtatggaaataacccttatttaggtagcaggaatgaatctggctttgcggag
gagctgcaggagcagcatagcattatcaaaaactctattgagcaactcaaaacttcagaa
tcactcagggccactctaatttctcacttgaaggaagcactgaacgagcaggagctcaaa
gtggaacaagtcagaaggcagcttcaggcagctcaatcccgatacaagaaagctgatgag
ctctgccaggagcttggaattgatgtggaaagttatcagccatctagtcaagggcttaag
aagtccagtcttccggaaatgcctgttgcctttgcttcagattcagctaatgctggttct
cctaggaagggacaatcgagtgcagtaatgtattcacaggagggagatgttggtgagcgc
agtgccgcagcagctaatgccgtgacaaaattttcttcggatgctgcttcagaagagatc
ctcggtggtgttttgtcttcacgagccaatgggggcaacattttgcagaaaacagaagag
tactcttctgttaataagaggcagaagctagaggatggcccatatatttctcagcctcaa
tcacagccaccactaccaccacccccacccccattcccacatcctgatacatttcaacca
ccaccaccacctgagtatcctccatcaccagagcctagcccaccaccgccgccaccttca
gcaccaccccaaataatcccgccgccgccgccaacttcaacgccaccccacataatctca
cctgtaccacctatagcaggtccatttgtaccctttcctgttggacctcctggtccaatg
actggagtgccatatggcacttttccatcatacactcctgtggtcaactttcccatgatg
atgccacctggtttccccggtggtccaaacccacctccagcttttcagggattagaggga
acgttttatggccctcctccataccccgcagcacctccaccgacggacaggaaatag
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