Phragmites australis (common reed): 133909584
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Entry
133909584 CDS
T10575
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
paua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133909584
03460 Fanconi anemia pathway
133909584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133909584
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133909584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
Motif
Other DBs
NCBI-GeneID:
133909584
NCBI-ProteinID:
XP_062208062
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Position
2:50219993..50233655
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AA seq
713 aa
AA seq
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MRYHQPTPPTQTAEHPSNQLNGGLFLFPTPKPQTLAQPWSQIPIRPPLSTPSPKPSLMAP
PSPKQPKPLPVPKQLKVNNPENDELARFFLEKWRSMMQEPGGLSENNYLTFANANRSLCA
AKEPIRTLKDFSKIKGVGQWLTRCMKGFFAESSQELSPARDDTAGGNGKKTRGPKCYLPK
KNTAAYAILITLLRAKISGKSFMLKQELIDAAEASGLSRDAVGPNKSKAKQSYGKDWYSG
WSCMKTLLSKKLVNKWSNPAKYMLTEEGEGTAHDCLSRSGLGDSVGPLIITSAHNISVAS
HNSDHCTSPGVAETMSGPFMATCRSSTSKLVCGSSTKEQSSYNGQVQTTNYCAEGIIFCD
SDSEEPYKKNSPLKGSEEFTERGGPPKLKTCIKGPTINCAPPDYSVSISHLSSQGIFEQQ
SSSTMGSAEFNVLDKDTAYMDNSILAMPPRQSNEKFREAYEVVFILDDREKFGSRSRKVA
DNIRSQINVPVEVKHLPVGDAIWIARHRKLRTEYVLDFIVERKEVSDLDGSITDNRYRDQ
KLRLKRCGLRKLIYLVEGDPNRSDAPERIKIACFTTEILEGFDVHRTSGYAETERTYGHL
THSIIEYYDTNFSTLANTARVCPTYDEFEARCHDLQKTTVSQIFALQLMQVPQVTEEAAL
AVIELYPTLISLVRAYSMLDGDTRAQEEMLKNKSKMVNAGASRNIFKLVWADG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagatatcatcaaccaacccctccaactcaaaccgcagagcacccctccaaccaactc
aatggcgggctcttcctcttccccaccccgaaaccccaaaccctagctcaaccctggtct
caaatcccaatccggccacccctctctaccccaagtcccaaaccctctctgatggcgccg
ccgtcgccgaagcagcccaagccgctgccggtgccgaagcagctgaaggtgaacaacccg
gagaacgacgagttggcccgcttctttctagagaagtggcggtcgatgatgcaggagccg
ggcgggctctcggagaataattacctcacctttgccaatgccaaccgcagcctctgcgcc
gccaaagagcccatccgaaccctcaaggacttctcgaagatcaagggtgttggacaatgg
cttacacgttgtatgaaagggttctttgcggaatccagccaagagttatctcctgcaaga
gatgatacagcaggagggaatggaaagaaaacaagaggaccaaaatgttatttgccaaag
aagaacactgctgcttatgcgatactgatcacactccttagggcaaagattagcgggaag
agttttatgctgaaacaagagcttatcgatgctgctgaagccagtggtctgtcacgagat
gcagtcggtccgaataaaagtaaagcaaaacagagttatgggaaggactggtactctggc
tggagctgcatgaagacattattgtctaaaaaacttgtcaacaagtggagtaacccagca
aagtatatgctaactgaagaaggggaaggcactgctcatgattgtctttcacggtctgga
ttaggcgattctgtaggacctttaattataaccagtgctcacaacatatctgttgcaagt
cataattcagatcattgcacgagtcctggtgttgctgaaacaatgtcagggccttttatg
gccacttgtagatccagcacatctaagcttgtttgcggcagttctacaaaagagcagagc
agttacaatggtcaagttcaaactactaactactgtgctgaaggaattattttctgcgat
tcagattcagaagaaccatataaaaagaacagtcctctgaaaggttctgaagaatttact
gagaggggtggtccgccaaaattgaaaacatgcatcaaggggcctactattaattgtgcc
ccgccagattactcagtttctatttctcatctatcatcccaaggaatattcgagcagcaa
tcttctagtacaatgggttctgccgaattcaatgtgctagacaaggatactgcttatatg
gacaattctatactagctatgccacctcgtcaatccaatgaaaaattccgtgaagcttat
gaagttgtgtttatattggatgatcgtgaaaaattcgggtctcgttcaagaaaagttgct
gataacattcgttcacagataaatgtaccagtagaggttaagcatttacctgtgggagat
gctatttggattgctcgtcataggaaacttcgcacagagtatgttcttgatttcattgtt
gaaaggaaagaggtttcggatttagatggctcaattacagacaacagatacagagatcag
aaattaaggctgaagagatgcggactaaggaagctgatatatcttgttgaaggtgatcca
aaccgctcagatgcaccagagaggattaaaatagcctgtttcaccactgagattctcgaa
ggatttgatgttcatagaaccagtggttatgctgaaactgaaaggacatatggccatctt
acacattcaataattgaatactacgatacaaacttctcaacccttgctaatactgctcgt
gtttgcccaacctatgatgagtttgaggcgaggtgccatgaccttcagaagacaactgtg
agccaaatatttgcacttcaacttatgcaggtgcctcaagtaacagaagaagctgcgttg
gctgttatagagctctatccaactctcatctcacttgtgcgggcatactcgatgcttgat
ggtgatacacgtgcccaagaagagatgttgaagaacaagagcaagatggtaaatgcaggg
gcaagcagaaatatcttcaagcttgtctgggctgatggatga
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