Phragmites australis (common reed): 133909638
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Entry
133909638 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133909638
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Gene cluster
GFIT
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NCBI-GeneID:
133909638
NCBI-ProteinID:
XP_062208145
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Position
2:50921524..50926348
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AA seq
424 aa
AA seq
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MAKPRRGRSASRSSSGSSSRSVSSGSVSSRSRSRSRSLSSSPSSPSRSRSPPAAKRSSPG
AWRGKSPSSPPKRGSPSRKGRSPSPPPKKASPPRKASPPAESAVLHIDHLSRNVNEAHLK
EIFGNFGEVVNVELSMDRLVNLPRGYGYIEYKKRADAEKALLYMDGGQIDGNVVKLRLTL
QPRQRASSPMKAPPPPKRDVPQNDKGASSAEKDAQQRPRELSPRRKPPSPPRKRSPPNRR
VESPRRPPDPSPRRRPDSPPVRRRVDPSPVRRGDTPPRRRPLSPPRRRSPSPPPRRHRSP
MRPSPRRGRGSPSPRRRSPGPPRRRSPPPRRLRSPPRRPPPPRRYSRSPPRRPLHSRSRS
ISPRRGRGPPLRRGRSDSSYSGSPSPPRKGPRRVSRSRSPRRPRRGRSISSDSRSSSSPS
PRRR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcggcgcgggcgctccgcctcgcgctcctcctccggttcctcctcccgc
tccgtctcctccggctccgtctcgtcccgctcgcgctcgcgctcccgctccctctcgtcg
tcgccatcctccccgtcccggagccgctcccctcccgcagccaagcgcagctcacctgga
gcatggagaggtaaatcaccttcatcacctcctaaaagaggttcaccctcaaggaaaggc
cggtcaccatcaccgccacctaagaaagcttcacctcccaggaaagcatctcctcctgct
gagtcggctgttctccacattgatcatctttccaggaatgtaaatgaggctcacttgaaa
gaaatatttgggaattttggtgaagtggtgaacgtggagctatcaatggaccgattggtt
aatcttcctcgtggctatggatatattgaatacaagaagagagctgatgctgagaaggct
cttctttacatggatggtggtcaaattgatggaaatgttgttaagttgaggctcactctt
caacctcgccaaagggcttcttcacctatgaaggcaccgccccctccaaaaagagatgtt
cctcagaatgacaaaggtgctagcagtgctgaaaaggatgctcagcagcggcctagggaa
ctatctccacgaagaaagccaccttcccctccacgaaagcgatctcctccaaatagaagg
gttgagtcaccgaggcgaccgcctgacccatcacccaggcgtcgccctgattctccacct
gttcgtcgtcgagtggatccttcccctgtcaggcgtggtgacacacctcctcgccggaga
ccactatctccacctagaaggcgttctccttctccaccacctagaaggcataggtcaccg
atgcgtccttcacctaggaggggtcgtggcagcccatcaccacgcagacgctcccctggg
cctccaagaaggcgctcaccacctccaaggcggttgaggagcccaccaagaaggccacca
cctccacgccgttatagtcgttctcctcctcgccgtccccttcactcccgttccagatca
atttctcctcgaaggggtcgaggacctccattgaggcgtggaaggtcagattcatcgtat
tccggatcaccaagtccaccaagaaaggggccaagaagggtatcaaggagtcgcagccct
agaaggcctcgtagaggaaggagcatttctagtgacagccgaagcagcagctcaccttcc
cctaggcgcaggtag
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