KEGG   Phragmites australis (common reed): 133909694
Entry
133909694         CDS       T10575                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52B-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
paua  Phragmites australis (common reed)
Pathway
paua04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133909694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:paua04121]
    133909694
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     133909694
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_IFT140_1st WDR55 Beta-prop_Aladin WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 MIOS_WD40 Beta-prop_WDR41 Beta-prop_RIG_1st Tricorn_2nd Beta-prop_VPS8 WD40_RFWD3 Aldo_ket_red Beta-prop_SPT8 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 133909694
NCBI-ProteinID: XP_062208217
LinkDB
Position
2:51420773..51424461
AA seq 470 aa
MAAADAKPAALRLNVPPAMAGALRLDPVASPSPSRRLDEAPKTPSPSKTTYSDRFIPCRS
SSRLQNFALLDTHTSPGSKDDTPYSRLLRAELFSPDSPASASPSTNLFRFKKDHSAPTSP
FAAAAAQQDCTAGSGETASPKKPPRKVPKTPHKVLDAPSLLDDFYLNLVDWSSQNMLAVG
LGTCVYLWSASNSKVTKLCDLGPRDSVCAVHWSREGSYLAIGTGLGDVQIWDSSRCKRIR
NMGGHQTRTGVLAWSSCILSSGSRDKNILQHDIRVPSDYISKFSGHRSEVCGLKWSHDNR
ELASGGNDNQLLVWNQRSQQPVLRLTEHTAAVKAISWSPHQQGLLASGGGTADRCIRFWN
TANGNVLNSIDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVATLTGHTMRV
LYLASSPDGQTIVTGAGDETLRFWNIFPSVKTQAPVRDSGLWSFSRSQIR
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggcggcggcggacgcgaagccggcggcgctgcggctcaacgtgccgccggccatggcg
ggcgcgctccgcctggaccccgtggcgtcgccttccccctcgcgccgcctcgacgaggcc
cccaagacgccctccccctccaagaccacctatagcgaccgcttcatcccctgccgctcc
tcctcccgccttcaaaacttcgcactcctcgacacccacacctcccctggctccaaggac
gacaccccctactcccgcctcctccgcgccgagctcttcagtcccgactcccccgcctcc
gcatcgcccagcactaatctcttccgcttcaagaaagaccactccgcgcccacctccccc
ttcgccgccgccgccgcacagcaggactgcaccgcaggatccggagagacggcctcgccg
aagaagccacccaggaaggtccccaagacgccgcacaaggttctggacgcgccatccctt
ctggacgacttctacctcaacctcgtagactggtcgtcgcagaacatgctcgccgtcggc
cttgggacttgcgtctacctctggtcggcgtccaacagtaaggtgaccaagctctgcgat
ctggggccgagggacagcgtctgcgccgtgcattggtcacgggaaggctcttatcttgcc
attggcaccggccttggagatgtccagatttgggatagctcgcgctgtaaacggattagg
aacatgggaggtcaccaaacacggactggggttttagcgtggagttcatgcatcttgtcc
tccggtagcagggacaagaacatattgcagcacgacatccgtgttcccagcgattacatt
agcaagttttctgggcacagatcagaggtttgtggactgaaatggtcgcatgacaaccgc
gagcttgcttctggtggaaatgacaaccagctgctagtatggaaccaacgctcgcaacaa
ccagtgttgagattgacagaacatacagctgcggttaaagcaatatcatggtcaccacat
caacaaggcctcctggcatcaggaggtggaacagctgataggtgtatcaggttctggaac
acggctaatggaaatgttctgaactcaattgacacaggcagccaggtatgcaaccttgcc
tggtgtaaaaatgtgaacgagcttgtgagcacacatggctattcccaaaatcaaatcatg
gtgtggaaatatccatctatgtcaaaggttgcaactctaaccggacatacaatgcgggtt
ctttacctagcatcatcacctgatggccagaccatagtaacaggagctggcgacgaaact
cttagattttggaacattttcccttcagtgaagacgcaggctcctgttcgtgatagtggg
ctctggtcattttcaagaagccaaatccgatga

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