Phragmites australis (common reed): 133909968
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Entry
133909968 CDS
T10575
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133909968
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133909968
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133909968
microRNA pathway
RISC loading complex
133909968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
133909968
NCBI-ProteinID:
XP_062208482
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All DBs
Position
1:complement(12401679..12409209)
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AA seq
904 aa
AA seq
DB search
MESNNGEADDLPPPPPLAPDIEPIKAEEAKKLSKPKKALVPRKGFGKKGQQIKLLTNHFK
VSLKNTDEFFYHYYVNLKYEDDRLVDGKGVGRKVIDKLQQTYATELANKDFAYDGEKSLF
TIGALPQVNNEFTVVLEDVSTGKMAANGSPGNDSPSGSDRKRVRRPYQTKTFKVELSFAA
KIPMSAIAQALRGQESEHTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGG
VMGCRGFHTSFRATQSGLSLNIDVSTTMIVKPGPVIDFLLANQKVDHPNKIDWAKAKRAL
KNLRIKTSPANTEYKIVGLSDRSCSEQMFTLKNRNGENGDPETTEMSVYDYFVKNRGIEL
RYSGDFPCINVGKPKRPTYFPVELCSLVPLQRYTKALSTLQRSSLVEKSRQKPQERMTVL
SDVLQRSNYDSEPMLMACGISIAKRFTEVDGRVLQAPKLKAGNGEDIFTRNGRWNFNNKR
LIRASSVEKWAVVNFSARCNVRDLVRDLIKCGGMKGIKVDQPFDAFEENPSMRRAPAVKR
VDDMFDQVKTKLPGAPKFLLCVLAERKNSDVYGPWKKKCLAEFGIVTQCVAPTRVNDQYL
TNVLLKINAKLGGLNSLLQIEASPAIPLVSKVPTIILGMDVSHGSPGQSDMPSIAAVVGS
REWPLISKYRASVRAQSPKMEMIDSLFKPQGTEDDGLIRECLIDFYTSSGKRKPEQIIIF
RDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFTLIVAQKNHHTKFFLPGSPDNVPPG
TVVDNKVCHPRNYDFYMCSHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVPELPRLHEKVRSS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacaatggtgaggctgatgacttgcctcctccacctcctttggctccagac
atagagccaattaaagctgaggaagcaaagaagttgtcgaaacctaagaaggcgctggtc
ccaaggaaaggttttggcaaaaaagggcagcagataaagcttttaacaaaccacttcaaa
gtttctctgaagaacacagatgaatttttctatcactactatgtgaatctgaagtatgaa
gatgataggctggttgatggcaagggggtagggagaaaagtgattgacaaactccagcaa
acttacgcaactgagcttgcaaataaagatttcgcatatgatggtgagaagagcctgttc
acaattggtgctcttcctcaagttaacaacgagtttactgttgtgctggaagatgtttcc
actggaaagatggctgcaaatggaagccctggcaatgatagtccttctggaagtgacagg
aaaagggttagaaggccctaccagacaaagacgttcaaagtggagctatccttcgcagcg
aaaattcctatgagtgcaattgcacaggctttgagaggtcaggaatccgagcatactcag
gaagcaatccgagtaattgatattattttgagacagcactctgcaaagcagggttgcctc
ttggtccgtcaatctttcttccacaataatccttccaactttgttgacttgggtggcggt
gtaatgggctgtagaggattccatactagcttccgtgctacacagagtggactttcactt
aatattgacgtgtccacaacaatgatagtgaaacctggtcctgttattgattttctactt
gccaaccagaaggttgatcatccaaacaagattgactgggccaaggctaagcgtgccttg
aagaatttaaggataaagacaagccctgcaaatacagaatataagattgttggtttgagc
gacaggagttgctctgaacagatgttcacactaaagaacagaaatggtgaaaatggtgac
cctgaaacaacagagatgagtgtttatgattactttgtcaagaaccgtggcatagagttg
agatactctggtgattttccctgtattaatgtggggaagccaaagcggccgacatatttc
cctgttgagctttgcagccttgtgcctttacaaagatacactaaggcgttgagtacactt
cagagatcttcacttgttgagaagtctaggcagaaaccacaagaaaggatgacagttctg
tctgatgtacttcaacgaagcaactatgactcggagcctatgctgatggcatgcggcatt
tcgatagccaaaagattcactgaagttgatggtagggtactgcaggcacccaagctcaaa
gctggaaacggagaagatatttttacacgtaatgggagatggaacttcaataataagagg
ctcatcagagctagcagtgtcgagaaatgggctgtggtgaacttttctgcacgatgcaat
gtcagggatcttgtccgagatctcatcaagtgtgggggcatgaagggaattaaagtagat
caacctttcgatgcatttgaagagaatccttccatgagacgtgcacctgctgtaaaaagg
gtggatgacatgtttgatcaagtaaaaacgaagcttcctggagcacccaagtttcttttg
tgtgttcttgctgagaggaagaattctgatgtttatgggccttggaagaagaaatgtctt
gctgaatttgggattgttacacagtgtgtggcacctacaagagtcaatgatcaatatctt
acaaatgtcctgcttaagataaatgcaaagcttggtggcttaaattcattgcttcaaatt
gaagcatctcctgctattcctcttgtatccaaggtcccaactatcattctgggaatggat
gtgtcccatggttcacctggacagtctgatatgccctccattgctgctgttgtgggttct
cgtgaatggcctcttatctcaaaatacagagcttcggtgcgtgctcaatcacctaagatg
gaaatgattgattccttgtttaagccacaaggaactgaggatgatggtctcattcgggag
tgtctcattgacttctacaccagttctgggaagagaaagcctgagcaaatcattatattc
agggatggggttagcgaaagccagtttaatcaggtgctgaacattgagttggatcaaata
attgaggcttgcaagtttctggatgagaaatggtgtcccaagttcacattgattgttgcc
cagaaaaatcatcatactaagtttttcttgcctggatctccagataatgttcctcctggt
actgttgtggacaacaaagtctgccatccaagaaactatgacttctacatgtgttctcat
gctggaatgattggtactacgaggccaacacattaccatattctgcatgatgagataggc
ttcagccctgatgacctccaggagttggtgcattcactctcttatgtgtatcaaaggagc
acaacagccatttcagttgttgctccgatctgttacgcacatcttgctgccgctcaggtc
ggccagttcataaagttcgacgagatgtctgagacctcgtccagccatggaggccacacc
tcggctggcagcgtcccagtgccggagctacctcgcctgcacgagaaagttaggagctcc
atgttcttctgctga
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