Phragmites australis (common reed): 133909998
Help
Entry
133909998 CDS
T10575
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133909998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133909998
03036 Chromosome and associated proteins [BR:
paua03036
]
133909998
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133909998
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133909998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
133909998
NCBI-ProteinID:
XP_062208505
LinkDB
All DBs
Position
2:30351111..30356908
Genome browser
AA seq
343 aa
AA seq
DB search
MASFNPTGAANQNPNNSFEVAPAPGDSVSSLSFSPKANHLVATSWDNQVRCWEVLPGGGC
QAKASISHDQPVLCSAWKDDGMTVFSGGCDKQVKMWPLLSGGQPTDFKGHEAPVKELAWV
PQMNLLVSGSWDKTLRYWDIRQPQPVHVQQLPERCYALSLCYPLMVVGTADRNIIVFNLQ
NPQAEFKRIISPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHRDG
NDIYSVNSLNFHPVHGTFATAGSDGGFNFWDKDSKQRLKAFSKRAAPITCSTFNQDGSIF
AYAVCYDWSKGAEKHNPSTSKTNIFLHSVQESDVKGKPRAGKK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcttcaaccccaccggcgccgcaaaccagaaccccaacaattccttcgaggtg
gctccggcgcccggagactcggtgtccagcctcagcttcagccccaaggcgaaccacctc
gtcgccacctcctgggacaatcaggttcggtgctgggaggtcctgcctggtggcggatgc
caagcgaaggcctcgatttcgcacgatcagccggtgctgtgctcggcgtggaaggatgat
gggatgactgttttctcgggaggttgtgataagcaggttaagatgtggcctttgctatct
ggtgggcagcccacggacttcaaagggcatgaggcacctgtcaaagaactcgcttgggta
ccacagatgaatcttcttgtcagtgggagctgggacaagaccttgaggtactgggacatc
aggcaacctcaaccagtgcatgttcagcaacttcctgagcgctgctatgctctatcactt
tgttatcctctcatggtggttggcactgctgatcgtaacataatagtcttcaatctgcag
aatccacaggctgaattcaagaggatcatatcacctttgaagctccagacaaggtgtctt
gctgcatttcctgatcaacaaggttttttggttggatctatagaaggacgagtcggtgtt
catcatgtggatgactctcagcaaagcaaaaactttacattcaaatgtcaccgtgatggc
aatgacatatactctgttaactcattgaacttccatcctgtgcacggtacatttgctact
gcaggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggctgaaggct
tttagtaagcgtgcagcacccatcacatgcagtacattcaatcaggacggctctatattt
gcttatgcggtatgctatgattggagcaagggcgctgagaagcataatccttctacttca
aagacaaatatctttctacatagtgtacaggaatctgatgtgaaaggaaagccccgcgct
ggaaagaagtag
DBGET
integrated database retrieval system