Phragmites australis (common reed): 133910178
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Entry
133910178 CDS
T10575
Name
(RefSeq) RING-H2 finger protein ATL73-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133910178
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133910178
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
133910178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
133910178
NCBI-ProteinID:
XP_062208675
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All DBs
Position
2:45804907..45805863
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AA seq
212 aa
AA seq
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MDVERLHARRLLSRAAAAVDALSPGPAVQAAEVRTRVAAPLGSTDATVIAILSLLLCGLV
VVLAVRAVVQCAFRITRRVCYGQDPPGDVEAAARERASSCQPGPKTKRGACIGLIPSHVY
PPEVELAGCGAAECAICLTEFAHGDRVRALPHCNHGFHVRCIDRWLAARQTCPTCRRKPF
AKTALPVPGRAEAPEAVQLQVHADAGQPENNH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaacggctgcatgcaaggaggctcctgtcgcgcgccgcggcggcggtagat
gccttgtcgccagggccggccgtgcaggcggccgaagtccgcacgcgagtagcagcaccc
ttgggctcgacggacgcgacagtgattgcgatactgtcgctgctcctctgcggcctagtg
gtcgtgctcgcggtgcgcgcggtggtccagtgcgcgttccgcatcacgcggcgcgtgtgc
tacggccaggatcctcccggcgacgtcgaggcggcggcgcgggagagggcctcctcctgc
cagcccggtcccaagacgaagcgaggggcctgcatcgggctgatcccgtcgcacgtctac
ccgcccgaggtcgagctcgccgggtgcggcgcggcggaatgcgccatctgcctcaccgag
ttcgcgcacggcgatcgcgtgcgcgcgctgccgcactgcaaccacggattccacgtgcgg
tgcatcgaccgctggctcgccgcgaggcagacgtgccccacgtgcaggcggaagccgttc
gccaaaaccgcactgccggtgccgggccgagcggaagcgccggaggccgtgcagctgcag
gtgcacgctgacgccggacagcccgagaataaccattag
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