Phragmites australis (common reed): 133910294
Help
Entry
133910294 CDS
T10575
Name
(RefSeq) coatomer subunit beta-2
KO
K17301
coatomer subunit beta
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133910294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133910294
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133910294
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133910294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Coatomer_g_Cpla
Cnd1
RAG2
Motif
Other DBs
NCBI-GeneID:
133910294
NCBI-ProteinID:
XP_062208788
LinkDB
All DBs
Position
1:complement(12904824..12910917)
Genome browser
AA seq
950 aa
AA seq
DB search
MEKPCSLLVHFDKGSAAMANEIKADLEGSDGAAKADAMRRAISLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDRRDPAGRALPEMILICQNLRNNLQSPNEYIRGVTLRFL
CRLSEPEVLEPLVPSVLSNLEHRHHFIRRHAISAISAIYRLPHGDQLIPDAPELVERALA
SEQDASARRNAFLMLCACAQERAVAYLLSNAERVTGWPDLLQMAVVDLIRKVCRSQNRAN
KGKYIKIIDSLLSATSTAVVYECAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLII
LDRLNELRTSHRDVMVGVVMDVLRALTSPNLDVKRKVLDLVLDLLTPRNVEEVVLYLKKE
VVKTQAGDLEKGGEYRQMLVQAIHACAVEFPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV
REIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAIATIKQCLG
DLPFYTVSEEGETTDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAVSETISTPSIAPG
SLSSTLNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKIESNKACTGALLIMTSILQ
LGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKIWLESCRHSFAKMLAEKQFRETEEM
KAKAQVSHAQPDDLIDFYHLKSRKGMSQLELEDEVYDDLKAATGGFTKDADDANKLNRIL
QLTGFSDPVYAEAFVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTL
APESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCADV
TFRNMWAEFEWENKVAVNTVLQDEKEFLNHIIKSTNMKCLTPPSALDGECGFLAANLYAK
SVFGEDALVNISIEKQHDGKLSGYIRIRSKTQGIALSLGDKITIKQKGGS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccatgcagcctcctggtccacttcgacaagggttccgccgcgatggcgaac
gagatcaaggcggatctggagggcagcgacggcgccgccaaggccgacgccatgcgccgc
gccatctcgctcctcctcaacggcgagacgctcccgcagctcttcatcaccatcgtccgc
tacgtgctcccctccgaggaccacaccgtgcagaagctgctcctcctatacctggagatc
atcgaccgccgggaccccgcgggccgcgcgctcccggagatgatcctcatctgccagaac
ctccgcaacaacctccagagccccaacgagtacatccgcggcgtcacgctacggttcctc
tgccgactctccgagcccgaggtactcgagccgctcgtgccgtccgtcctttccaacctc
gagcaccgccaccacttcatcaggaggcacgccatctcggcaatctccgcgatctaccga
ctaccgcacggggaccagctcatccccgacgcgccggagctcgtcgagcgcgcgctcgcg
tccgagcaggacgcgtccgctcggaggaacgccttcctcatgctctgcgcctgcgcgcag
gagcgagccgtcgcctacctgctctccaacgccgagcgcgtcaccgggtggcccgatctg
ctgcagatggcagtcgtagatctcatccgcaaggtctgccgctcccagaaccgggcaaac
aagggcaagtacatcaagatcattgactctctcctttccgcgaccagtacggcggttgta
tatgagtgtgccggtgcgcttgtgtcgctctcctcggcgcccacagctgtccgtgctgcc
gcaaacacatactgccagctgctctcatcccagagcgacaacaatgtgaagctcattatc
ctggaccgcctgaacgagttgcgcacctcgcaccgggatgtgatggtgggggtggtgatg
gatgtgctgcgagcgctcaccagccccaacttggacgtcaagaggaaggtgcttgatttg
gtgctcgatctgctcaccccgcgcaatgttgaggaggttgtgctttacctgaagaaggag
gtggtcaagacgcaggctggggaccttgagaagggtggcgagtaccgccagatgctggtg
caggccatccatgcctgtgctgttgagttccccgaggtggctggttctgtggtgcacctc
ctcatggatttccttggtgacactaatgttgctgcagcggttgatgttgtgctgttcgtg
cgtgagatcattgagaccaatcccaagctgcgtgtttccatgatccagaggctgattgat
acattctatcagattcgggcatcccgggtctgctcatgcgctctctggatccttggggag
tactctctctcgttatcagaggtagagagtgccattgccaccattaagcaatgccttggg
gatctaccattctacactgtctcagaggaaggtgaaacaactgattctgccaagccagcc
cagccggtggtgaactctgtcactgtatcttccaggcggcctgttgttcttgcagatggc
acttatgccacacagagtgctgtctctgagaccatttcgactccatcaattgctcccggg
tcattatcatcaaccctgaatctcagatcactcattctgtcaggcgatttcttcctggct
gcagttgttgcctgtaccctgaccaagcttgtattaaggttggaggaggttcagccatcg
aagattgaatcaaacaaggcttgcacgggagcattgctgatcatgacgtccattctgcag
ctggggcagtcctcataccttccccacccgattgataatgattcatatgataggattgtg
ctttgtgtgaggttgctttgcaatactggtgatgatgtgaggaagatttggttggagtca
tgcagacacagctttgcaaaaatgcttgctgagaagcaatttagggagacagaggagatg
aaggcgaaggcgcaggtctctcatgcccagccggatgatcttatagatttctaccacctg
aagagcagaaaaggcatgagccagcttgagttggaagatgaggtctacgatgatttgaag
gctgcaactggtggatttaccaaggatgcagatgatgcaaacaagctcaatcgcattcta
caattgactggcttcagtgatcctgtatatgctgaagcatttgtaacagttcaccattat
gatattgtacttgatgtcactgtcattaaccgtacgaaggagacactgcagaacttgtgc
ttggaattggctacaatgggggacctcaaacttgttgaccgccctcagaattacaccttg
gctcctgaatcaagcaaacagatccgcgctaatatcaaggtttcatcgacagagactgga
gtcatatttgggaacatagtttatgagacttcaaatgtgatggaacggtcagtggttgtc
ctaaatgatattcacattgacatcatggattacatctcacctgctacatgtgctgatgtt
actttccgcaacatgtgggcagaatttgagtgggaaaacaaggtggcagtgaatactgtt
cttcaggatgagaaggagttcttgaatcatattatcaagtcaacaaacatgaagtgtcta
acaccaccgtctgcgcttgatggagaatgtggtttcctcgctgccaatctttacgcaaag
agtgtgtttggcgaagatgctttggtgaacatcagcattgagaagcaacatgatggtaag
ctgagcggttatatcagaataaggagcaagacccaaggcattgccctcagcttaggggac
aagatcaccatcaagcagaagggaggcagttaa
DBGET
integrated database retrieval system
