Phragmites australis (common reed): 133910312
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Entry
133910312 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133910312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133910312
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133910312
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133910312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
133910312
NCBI-ProteinID:
XP_062208797
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Position
2:complement(4722542..4724535)
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AA seq
273 aa
AA seq
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MTMQHHPNVKVVRVEGEAAAATSHHDKEKITVAIDAELLECGVCFGPLTPPLFQCTKGHI
SCSECCTDGALDYDCLMCREPETATRCRVMERILDGLSVPCAFRQHGCAEMVPYADKQDH
VASCIHAPCHCPIAGCAGYTGASLRYHIKVDHPAVQSTLVRLGCLTALRMRGGEPARVAC
LGNGRTEFLLVVGQDVPSGRTLSVLHLMDEPSDDEDFKYKIEVVGEAGVLSLSGQAEGVE
RLAKPYQASAFLFVPNAIWDSSPEDVPVFIELK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcagcatcatccgaatgtgaaggtggtccgggtggaaggtgaggccgcggct
gcgacgagccaccacgacaaggagaagatcaccgtcgccatcgacgccgagctgctggaa
tgcggcgtttgcttcggtccattgacgccacctcttttccagtgcaccaaaggccacatc
tcgtgttcagagtgctgcaccgatggggctctggactacgattgcctgatgtgccgtgag
ccggagaccgccacccgctgccgcgtcatggagcgcatcctcgacggcctgtccgtgccg
tgcgcgttccggcaacacggctgcgccgagatggtcccgtacgcggacaagcaggaccac
gtcgcgtcgtgcatccacgccccgtgccactgccccatcgccggctgcgccggctacacc
ggcgcgtccctgcgctaccacatcaaggtggaccacccggcagtgcagagcaccctcgtc
aggcttggctgcctcaccgcgctgaggatgcgcgggggcgagccggcccgcgtggcgtgc
ctcgggaacggaaggacggagttcctgctcgtcgtcggccaggacgtgccgtcggggcgc
acgctgtcagtgctccacctcatggacgagccgtccgacgatgaggacttcaagtacaag
atcgaggtggtcggcgaggccggcgtgctctcgctgtccggtcaggccgagggcgtcgag
cggctggcgaagccgtaccaggcgagcgcgttcctgttcgtccccaacgccatctgggac
tcctcccctgaggacgtcccagtgttcatcgagctgaaatga
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