Phragmites australis (common reed): 133910647
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Entry
133910647 CDS
T10575
Name
(RefSeq) la-related protein 6C-like
KO
K15191
La-related protein 7
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133910647
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
133910647
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Paralog
GFIT
Motif
Pfam:
La
RRM_1
RBD_AKAP-17A
DUF5081
PTS_2-RNA
Motif
Other DBs
NCBI-GeneID:
133910647
NCBI-ProteinID:
XP_062208952
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Position
3:complement(30620828..30623433)
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AA seq
424 aa
AA seq
DB search
MAQDGSGSSCKASPSSSDCSTPFRFNVHAREFVPMSPAASPLTAAGYYSPFLQLSDGGGG
IGLGADWRSFTEPDPKFFLPDFGHASIAGAAGSGGQPKGASPADIAHKIIKQVEYQFSDT
NLVANDFLMKIMNKDPEGYVPMSVISSWKKIKAMGVTHQLLVNALRTSAKLVVSDDGKKV
RRAQPFTEKHKEELQSRTVIAENLPDDSTRNSLEKIFGAIGSVKNIRICHPQEPSSAKAT
KSDANALVSNKLHALIEYETSQQADRAVDKLNDERNWRKGLRVRPVLRRSPKTVMRLKRP
DFDHLIATNEEHSPQSQVPLDSLTAEHLSEHNQEEQHVGSKKPWGRGRGRPHNAAPPHPV
HAAGTAGHWDSLASPRQAPQRPRMPDGTRGFTMGRGRPSPAVAAAAVLRSTPVRAAAAPA
AVVI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggacggcagcgggagctcctgcaaggcgtcgccgagcagcagtgactgctcc
acaccgttcaggttcaacgtgcacgcgcgggagttcgtgcctatgtcgccggcggccagc
ccgctaacggccgccggctactactcgccgttcttgcagctgtccgacggtggtggtggc
attgggctgggcgcggactggaggtcctttaccgagccagaccccaagttcttcttgccg
gactttgggcacgccagcatcgcgggtgctgccggcagcggcgggcagccaaagggtgca
agtccagccgacattgcgcacaagattatcaagcaggttgagtaccaattcagcgatact
aatttggttgcaaatgatttcttgatgaagatcatgaacaaggaccctgagggatatgtt
cctatgtctgttatttcatcctggaagaaaattaaggctatgggggtaacacatcaactg
ctggttaacgctcttcggacctcggcaaagcttgttgtcagtgacgacggcaagaaagtg
cggcgggcacaaccattcacagagaaacacaaagaagagctgcagtctcgcacggttatc
gcggagaatttgccagatgattccacaagaaatagcctcgagaagatcttcggtgccatt
ggaagtgtgaagaacatcagaatatgtcatccgcaagaacctagctctgcaaaggctaca
aagtctgacgcaaacgcgctagttagtaacaagttgcatgcgctcatagagtacgagaca
tcacaacaagctgacagagcagtcgacaagttaaacgatgaaagaaactggaggaagggt
ctacgcgtgcgcccggtgctacgacgatcgcccaagacggtgatgcggctcaagcggccg
gacttcgaccacctcatcgccaccaacgaggagcattcgccgcagtcccaggttccgttg
gactccctgacggcggaacacttgtctgaacacaaccaggaggagcaacacgttgggagc
aagaagccgtggggcagagggcggggcaggccgcacaacgccgcgccgccgcatcccgtt
cacgctgcaggcacggccgggcattgggactcactggcgagcccccggcaagcgccgcag
aggccgaggatgccagacggcacgcgcgggttcaccatggggcgagggaggccgtcgccg
gcagtggcagctgctgcggtcctccggagcacaccggtccgggcggccgctgctcctgca
gctgtcgtgatttag
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