Phragmites australis (common reed): 133910811
Help
Entry
133910811 CDS
T10575
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Module
paua_M00081
Pectin degradation
Brite
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133910811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133910811
NCBI-ProteinID:
XP_062209053
LinkDB
All DBs
Position
3:complement(48006651..48008175)
Genome browser
AA seq
439 aa
AA seq
DB search
MASRKLQPVFLAPLLALLFFSSALEAAGNGNGTSADGARSSSSSANGADAGPRGRSLASS
QNALFSLDSYGARGDGRHDDTQALAKAWKAACASPRHAVVLVPRGKRYLLKLVSLSGPCK
SSVVVAVQGTLVASPNRADWGDKDRRHWIVFRGVNKLTVNGGGTIDGNGDKWWQHSCKIN
KALPCNEAPTALSFHYCTNLKVEDLKIVNSQQIHMSIEDCTTVQLARLSITAPGTSPNTD
GIHITRSKDVQVTNCKIKTGDDCMSIEDGTHNLHVSKVVCGPGHGFSIGSLGDDNSRAEV
SGITIDTVQLYGTTNGARIKTYQGGSGYAKDITFQNMILYNVKNPIIIDQNYCDKAKPCK
AQGSAVEVSNVVFNNIRGTTITKDAIKLNCSKNVPCHGIALKNIDLKMEGGKGATESTCQ
NAKWRKSGTVLPQPCTAKN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgtaagctgcagcctgtgttcttggcgcctctcctcgcgctgctcttcttt
tccagtgctctggaggctgcaggcaatggcaatggcacctcggccgacggcgcgagatcc
tcgagcagctccgccaatggagctgacgccgggcccaggggcaggtcgctggcgtcgtcg
cagaacgcactgttcagcctggacagctacggcgcacgcggcgacgggaggcacgacgac
acgcaggctctggcgaaagcatggaaggcggcctgcgcctccccgcggcatgccgtcgtg
ctcgttcccaggggcaagcgctacctgctcaagctcgtcagcctctccggcccgtgcaag
tccagcgtcgtggtcgcggtgcagggcacgctggtggcgtcgccgaaccgggcggactgg
ggtgacaaggacaggaggcactggatcgtgttccgaggcgtcaacaagctcaccgtcaac
ggcggcggcaccatcgacggcaacggcgacaagtggtggcagcactcgtgcaagatcaac
aaggctctcccgtgcaatgaggctccaacagctttgtcattccactactgcacgaatttg
aaggtggaagatctaaaaattgtgaatagccaacaaattcacatgtcgatcgaggattgc
accactgtacaattggcacgcctgtctatcacagcgcctggcactagtcccaacactgac
ggcatccacatcactcgcagcaaagatgtgcaggtcacaaactgcaagatcaaaactggg
gatgactgcatgtcaatcgaggatggaactcataatcttcatgtctcgaaagttgtgtgt
gggccgggacacggattcagcattggaagcttgggggatgacaactcaagggctgaagtc
tcaggcattaccatagacacggtgcaattatatggaacaaccaatggagctcggatcaag
acatatcaaggcggaagtgggtacgcaaaggatatcacattccaaaacatgatcttgtac
aatgtcaagaacccgataatcatcgatcagaactattgcgacaaggctaagccatgcaaa
gcacaaggatcagcagtggaggtcagcaatgtggtcttcaataacatcaggggcacaacc
attaccaaggacgccattaagttgaactgcagcaagaatgtcccatgccatggcattgcc
ttgaagaacattgacctgaaaatggagggcggtaagggtgccacagaaagcacctgccag
aatgcaaaatggagaaaatctgggacagttcttccacagccctgcactgccaaaaactag
DBGET
integrated database retrieval system
