Phragmites australis (common reed): 133910835
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Entry
133910835 CDS
T10575
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133910835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133910835
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133910835
mRNA degradation factors
5'-3' decay
Decapping complex
133910835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
133910835
NCBI-ProteinID:
XP_062209063
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All DBs
Position
3:complement(49377940..49381119)
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AA seq
207 aa
AA seq
DB search
MAWSRSGGGGKVTPNLEWDQEGTRALNLSVLRRLDPAITDILIIAAHVTTYSFDEDILDW
SRKPVEGSFFVVKRNTQPRFQLFVMNHLNTENLVEDLLTDFEYQVQVSYVMYRNAAEEII
GIWFYNPQECEEVAHLFSRIRYAYSRVSPKANLSSKSVFEDLEAASRPSAVPAAEDTLER
LASPTLLPDDVEEFMLAASKINYACFL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggagcaggagcggaggcggagggaaggtgacgccaaacctggagtgggaccag
gagggcacgcgggcgctcaacctcagcgtgctgcggcgcctcgaccccgccatcacggac
atcctcatcatcgccgcgcacgtcaccacctacagcttcgacgaggacatactggattgg
agccggaagcctgtggaggggtcgttctttgtcgtcaaaaggaacacccaacccagattc
caattgttcgtcatgaatcatctgaatacagagaatctagtcgaagatctcttgacggat
tttgagtatcaggtgcaagtttcctacgtgatgtaccgtaatgctgcagaagaaattatt
ggaatttggttctataacccacaggaatgtgaagaagttgcacacctttttagtaggata
cgatatgcatattctagggtgtctcccaaggcaaatctttcttccaaaagtgtgtttgaa
gatctggaagcagcgtctaggccatctgctgtacctgcagctgaagatactctagaacgg
ctggcatcacctaccttgttaccagatgatgttgaagagttcatgttagccgcttcaaag
attaattatgcatgtttcctgtga
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