Phragmites australis (common reed): 133911175
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Entry
133911175 CDS
T10575
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9
KO
K05391
cyclic nucleotide gated channel, plant
Organism
paua Phragmites australis (common reed)
Pathway
paua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133911175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133911175
Ion channels [BR:
paua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133911175
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
133911175
NCBI-ProteinID:
XP_062209364
LinkDB
All DBs
Position
3:37179650..37181787
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AA seq
669 aa
AA seq
DB search
MQGSAQLRTIGRSLRAGASMAAVFQEDLKNTSRRIFDPQDRLLVRLNRAFLISCIVSIAV
DPMFFYAPVVTDGGSGSNLCVGIDRWLAIATTVVRTVVDLFFLGRIALQFRTAYIAPSSR
VFGRGELVIDTAQIARRYLRRFFAADLLSVLPLPQVVIWKFLHRPKGTAVLATKDALLFI
VFIQYVPRLVRIYPLSSELKRTSGVFAETAYAGAAYYLLWYMLASHIVGAFWYLLSIERV
SDCWRNACNEFPGCNRIYMYCGNDKQLGFLEWRTITRQVINETCEPKKDGTTPFNYGIYS
PAVVSEVIKSEDNTSKLLFCLWWGLANLSTLGQGLKTSIYTGEALFSIALATFGLILMAM
LIGNIQTYLQSLTVRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLNTHGVDEE
ALVQNLPKDLRRDIKRHLCLGLVCKVPLFANMDERLLDAICERLKPSLCTEHTYIIREGD
PVDQMVFIIRGSLESITTDGGRTGFFNHSLLEEGDFCGEELLTWALDPKAGVCLPSSTRT
VRALSEVEAFALHAEELKFVTGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHLK
RRATELRRREEEELEEDEGRSNSFKTTILVSRFAANALRGVHRQRSRRAARELLMPVPKP
REPDFADDD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggtccgcgcagctgcgcacgatcgggcggtcgctccgggccggcgcgtccatg
gcggccgtgttccaggaggacctcaagaacacctcccgccgcatcttcgacccgcaggac
cggctgctggtgcgcctcaaccgcgccttcctcatctcctgcatcgtctccatcgccgtt
gaccccatgttcttctacgcgcccgtcgtgaccgacggtgggagcggaagcaacctgtgc
gtcggcatcgaccggtggctcgccatcgccaccaccgtcgtgcgcaccgtcgtggacctc
ttcttcttgggccgcatcgcgctgcagttccgcaccgcctacatcgcgccgtcctccagg
gtttttggacgcggcgagctcgtcatcgacaccgcgcagatcgcgcgaaggtacctccgc
cgcttcttcgccgccgacctcctctccgtgctcccgctcccgcaggtggtcatctggaag
ttcctgcaccggcccaagggtaccgccgtgctggccaccaaggatgcgctgctcttcatc
gtcttcatccagtatgtcccacgcctggtgcgcatctacccgctctcgtcggaactcaag
cgcaccagcggcgtcttcgccgagaccgcctacgccggcgccgcctactatctcctctgg
tacatgctcgccagccacatcgtcggcgcgttctggtacctgctgtcgatcgagcgtgtg
agcgactgctggaggaacgcgtgcaacgagttcccgggctgcaaccgcatctacatgtac
tgcggcaacgacaagcagctcggcttcctggagtggcgcaccatcacccggcaggtgatc
aacgagacgtgcgagcccaagaaggacggcaccacccccttcaactacggcatctactcg
cccgccgtcgtgtcggaggtgatcaagtccgaagacaacacctccaagctgctcttctgc
ctctggtggggcctcgccaacctgagcacccttggccagggcctgaagaccagcatctac
actggggaggcgctcttctccatcgcgctcgccaccttcggcctcatcctcatggccatg
ctcatcggcaacatccagacctacctccagtccctaaccgtgcggctggaggagatgcgc
gtcaagcggcgcgactcggagcagtggatgcaccaccgcctgctgccgcaggagctccgc
gagcgcgtccgccgctacgaccagtacaagtggctcaatacccacggcgtcgacgaggag
gcgctcgtccagaacctgcccaaggacctacgccgtgacatcaagcgccacctctgcctc
ggtctcgtctgcaaggtgccgcttttcgccaacatggacgagcgcctcctcgatgccatc
tgcgagcgcctcaagcccagcctttgcacggagcacacctacatcatccgggagggcgac
cccgtcgaccagatggtcttcatcatccgcggcagccttgagagcatcaccaccgacggc
ggacgcacgggcttcttcaaccacagcctgctcgaggagggagacttctgcggcgaggag
ctcctcacgtgggcgctcgaccccaaggccggggtctgcctgccgtcgtccacgcgcact
gtcagggcactctccgaggtcgaggccttcgcgctgcacgccgaggagcttaagttcgtg
acggggcagttcaggcgcatgcacagcaagcaggtgcagcatacgttccggttctactcg
cagcagtggcgcacctgggcggccacctacatccaggccgcgtggcgaaggcacctcaag
cgcagggccaccgagctgcgacgcagggaggaagaggagctggaggaggacgaaggcagg
tccaatagcttcaagaccacgatattggtgtcgcggttcgcggccaacgccctgcgcggc
gtgcaccgacagcggtcgaggcgggccgcccgggagctcctgatgcctgtgcccaagcct
cgggagcctgacttcgccgacgacgactga
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