Phragmites australis (common reed): 133911282
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Entry
133911282 CDS
T10575
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Module
paua_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133911282
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133911282
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
133911282
NCBI-ProteinID:
XP_062209465
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Position
3:48011989..48013994
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AA seq
435 aa
AA seq
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MASRLVFLAPLLVVLFMSSALGAAGTTSDGTSAGGVSSSSSSNAADAAARGSSLASSQSV
FSLDCYGARGDGRHDDTRALAKAWTAACASSRPAVVLVPKGKRYLLKLVSLSGPCKSSVV
VAVQGTLVASPNRADWGDKDRRHWIVFRGVNKLTVNGGGAIDGNGDKWWQHSCKINKALP
CKEAPTALSFHYCTNLRVEDLKIANSQQIHMSIEDCTTVQLARLSITAPGTSPNTDGIHI
TRSKDVQVTNCKIKTGDDCMSIENGTHNLHVSNVVCGPGHGISIGSLGDDNSRAEVSGIT
IDMVKLYGTTNGARIKTYQGGSGYAKDITFQNMIMDCVKNPIIIDQNYCDKAKPCKAQGS
AVEVSNVVFKNIRGSTITKDAIKMNCSKNVPCHGITLQNIDLKMEGGKGATESTCQNAKW
RKSGTVLPQPCTAKN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgtcttgtgtttttggcgcctctcctcgttgtgctcttcatgtccagtgct
ctaggagctgctgggacgacgagcgatggcacctcggccggcggcgtgagctcctcgagc
agctctaatgcagccgatgccgcggccaggggcagttcgctggcgtcgtcgcagagcgtg
ttcagcctcgactgctacggcgcccgtggcgacgggaggcacgacgacacgcgggcgctg
gcgaaggcgtggacggcggcgtgcgcctcctcacggccggccgtcgtgctcgtccccaag
ggcaagcgctacctgctcaagctcgtcagcctctccggcccgtgcaagtccagcgtcgtg
gtcgcggtgcagggcacgctcgtggcgtcgccgaaccgggcggactggggtgacaaggac
aggaggcactggatcgtgttccgtggggtcaacaagctcaccgtcaacggcggcggcgcc
atcgacggcaacggcgacaagtggtggcagcactcgtgcaagatcaacaaggctctcccg
tgcaaggaggctccaacggctttgtcattccactactgcacgaatttgagggtggaagat
ctaaaaattgcgaatagccaacaaattcacatgtcgatcgaggattgcaccactgtacaa
ttggcacgcctgtctatcacggcgcccggcactagtcccaacactgacggcatccacatc
actcgcagcaaagatgtgcaggtcacgaactgcaagatcaaaactggggatgactgcatg
tcaatcgagaatggaacgcataatcttcatgtttcgaatgttgtgtgtggaccagggcac
ggaattagtattgggagcttaggagacgacaactcaagagctgaagtctccgggattacc
atagacatggtgaaattgtatggcacaaccaatggagcacgcattaagacataccaggga
ggaagtgggtacgcaaaggacatcacattccaaaacatgatcatggactgtgttaaaaac
ccaataatcatcgatcagaactactgcgacaaggctaagccgtgcaaagcacaaggatca
gcagtggaggttagcaatgtggtcttcaagaacatcagggggtcaaccattaccaaggat
gctattaagatgaactgcagcaagaatgtcccatgccatggcattaccttgcagaacatt
gacctgaaaatggagggcggcaagggtgccacagaaagcacctgccagaacgcaaaatgg
agaaaatctgggacagttcttccacagccctgcactgccaaaaactag
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