Phragmites australis (common reed): 133911330
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Entry
133911330 CDS
T10575
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133911330
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133911330
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
133911330
NCBI-ProteinID:
XP_062209508
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All DBs
Position
3:104547..116083
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AA seq
909 aa
AA seq
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MASPGSSVATVSVSTSSSMGLGKTLQAISLLSYLKTQRIAPGPFLVLCPLSVTDGWLSEF
KKFCPSLRVMQYVGDKVHRRHLRRTMYEDAQKSSTSSDSNGLSFDVLMTTYDIALMDQDF
LSQIPWHYAVIDEAQRLKNPSSVLYNVLEQRFIMPRCLLLTGTPIQNNLSELWALMHFCL
PLIFGKLDEFLSTFNEAGDSMTGAEANKANRQFKILKHILKAFMLRRTKALLIESGILAL
PPLTELTVMVPLTQLQKKLYLSVLRKELQTLLSFTGGSSRHQSLQNICKCWYLEEVKKNS
TTGSRHHPGFVLKEGTTKVPTFYEHPASSPGGRPPQLEALPTELSLGSQALVIQLRKACS
HPYLFSGIEPEPYVEGEHLVEASGKLILLDLVLKKLHDLGHRVLLFAQMTQTLDILQDFL
ELRSYTYERLDGSVRAEERFAAIRNFSSQSTKGLMRDDNQSQAFVFMISTRAGGVGLNLI
GADTVIFYEQDWNPQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSH
NIIGEEDATNGKERDLGNEASDMKSIIFGLHLFDPMDTTAETINEDTAAETISAKTLAKL
KTMSEKVVMMRSHEPSEKDERAFEINLNLTDSSGTMIRKASDSITVDPGLNEAVYLSWVK
KFKEASDSIEETTAELGRQRAAPEEKLLKREANKKKTEEKRLAKWEALGYQSLAIKDPGI
IAKQNIPDSGSVQLVYGDCTDPLKVCPTESAIIFSCIDNSGTWGHGGMFDALTSLSTCIP
DAYHRASEFDDLHMGDLHLIQLDEANCSRSFEAPLWVALAIVQSYNPRRKVPRSEISMSD
LELCLSKAAFSAAQRSASIHMPRIGYQGGSQRSEWYTIERLLRKHSSLHGINIFVYYFQR
SSRQQTYSN
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcctggctcatccgtcgctaccgtctcggtgtcaacgtcgtcctcgatgggg
cttggcaagaccctacaagcaatttctctcttgagctacctcaagacccaacgcatcgca
cctggaccgtttttggtattatgtcctctaagtgtcacagatggctggctctcagagttc
aaaaaattttgtccttctttgagagtcatgcagtatgtcggtgataaggtgcaccgtcgt
catcttcgcagaaccatgtatgaagatgcccagaaatcttccacgtcatctgattctaat
ggattatcatttgatgtgctcatgacaacctatgacatagccttgatggatcaagatttt
ctttcacaaatcccctggcactacgcagttatcgatgaggctcaacgtctcaagaatcca
tccagtgtattgtataatgtccttgagcaacgtttcatcatgccaaggtgtctactacta
acaggaactcctatccagaacaacctttctgaactatgggcgttgatgcacttttgcttg
cctttaatatttggaaagctggatgagtttctttctactttcaatgaagcaggagactcg
atgacaggtgctgaagctaataaagcaaacagacaattcaagatcctgaaacatatactc
aaagcatttatgctccgtcgaacaaaagctttactaattgagagtggaattctggcgctg
cctccactaactgagctaacagtgatggtgccactgacgcagttacaaaagaagctctac
ttgtcggtgttgagaaaagagctgcaaacacttctttcatttactggaggatcatctcgc
catcagtctttgcaaaacatttgcaagtgttggtatttagaagaagtaaaaaaaaactcg
accacggggagcagacatcaccctggcttcgtcttaaaggaggggactactaaggtgccc
actttttacgagcacccggcttcgagcccaggtgggcggccccctcaactggaggctcta
ccaactgagctatcactcggttctcaagcgttggttatacaattgcggaaagcttgcagt
cacccatatttattcagtggaattgaacctgagccttatgtggaaggggaacatttagtt
gaggctagtggaaagctcattttgctcgatcttgttcttaagaagctccatgacttaggc
catcgtgttctgctatttgctcagatgacccaaacactggacattcttcaggacttcctg
gaactgcgcagttatacttatgagcgcctggatggttcagtgcgtgctgaggaacggttt
gcagcaattagaaatttcagctctcaatctaccaaaggtcttatgagagatgataatcaa
agccaagcttttgttttcatgatatcaactagagcagggggtgtggggcttaatctcatt
ggtgctgatactgttattttttatgaacaagactggaatcctcaagctgacaaacaggcc
ttgcagcgtgctcaccgcattggacagttgaatcatgtattgtcaataaatttggtatcg
cagcgcacaattgaagaggtcatcatgcgaagagccgagagaaaacttaagcttagccac
aatattattggagaagaggatgcaactaatgggaaggagagagatctgggaaatgaagct
agtgacatgaaatcaattatctttggcttgcacctgtttgatccgatggatacaaccgca
gaaacaatcaatgaggacacagctgctgagaccatcagtgcaaagacactggcaaagttg
aaaacaatgtctgaaaaggttgtcatgatgcgtagtcatgaaccttcagaaaaggatgaa
cgggcatttgaaatcaacctaaatttgactgacagcagcgggactatgattagaaaggct
tctgattccattactgttgatcctgggcttaatgaagctgtatacctatcctgggtcaag
aagttcaaagaggcttccgattctattgaagagaccacagctgaactaggaaggcagaga
gcagcacctgaagagaagctcctgaaacgtgaagctaacaagaaaaaaacagaagaaaag
agattagccaagtgggaagctttggggtaccagtcactagcgatcaaagaccctggtatc
atagcaaaacagaatattccagactcaggatccgtccaacttgtatatggagattgcact
gatcctttgaaggtttgtcccacagagtctgccatcatattcagttgcatagataattct
gggacatggggacatggaggaatgtttgatgctttgactagtctctcgacgtgcattccg
gatgcttatcatcgtgcttctgaatttgatgatctccacatgggggatcttcacttgatt
cagcttgatgaagccaactgtagcaggagtttcgaagcacctttatgggtggcactggct
attgttcagtcttacaatccgagacgtaaagttccaagaagtgaaatctccatgtctgat
ttggagctgtgtttatcaaaagcagccttctcagctgctcagcgttctgcgagtatccac
atgccccgaattggttaccaaggtggttcccaacgatcagaatggtacaccatagaacgc
ctgctcaggaaacactcatctctccatggaatcaacatttttgtgtactactttcagcgt
tcatcgaggcaacagacatattctaactag
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