KEGG   Phragmites australis (common reed): 133911334
Entry
133911334         CDS       T10575                                 
Name
(RefSeq) coatomer subunit alpha-3-like
  KO
K05236  coatomer subunit alpha
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133911334
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133911334
Membrane trafficking [BR:paua04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133911334
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133911334
  Exosomal proteins of bladder cancer cells
   133911334
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta TPR_COPA_B Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_RIG_2nd Fis1_TPR_C Beta-prop_ACSF4 Beta-prop_At4g14310 Zn_ribbon_19 Beta-prop_DCAF12 ENTH
Other DBs
NCBI-GeneID: 133911334
NCBI-ProteinID: XP_062209518
LinkDB
Position
3:133118..137775
AA seq 1215 aa
MLTKFETKSNRVKGLAFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEYPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSVSPADDIMR
LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTAIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRYYEYSTQKEVQVAPIRRPG
TVSLNQSPTTLSYSPTENAILICSDVDGGSYELYIVPKDSAGRSDYLQEARKGAGGSAVF
IARNRFAVLEKSSNNVLVKNLKNEIVKKTPLPLATDAIYYAGTGNILCKAEDRVAIFDLQ
QRLVLGELQAPTVKYVVWSSDMESIALLSKHAIVIANKKLVHRCTLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIIRTLYVPIYITRVIGNSIFCLDRDGKNKLITVDASEYI
FKLALFRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKELDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFDRLAFLYLITGYLDKVGF
MCKIAGQNNNLMGQFHNALYLGDVRKRVEILENAGQLPLAYVTAATHGLIEIAERLVAEL
GENAPSLPEGKASSLLIPPAPLTSCGDWPLLKVMRGIFDAGLDATGRADQDEYCEDAGGD
WGDEELDIVDVNNVMENGDIVDHNEEDEANEEEGGWDLEDLELPPETETPKAAGPARSSL
FVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGVKNFTPLKPLFLDAHMGS
HTFLRAFASAPVVSVAIEKGWTESASPNVRGPPALVFTFSQMDGKLKAAYKATTEGKFPE
ALRQFLNILHIIPLLIVDSRREVDEVKELIEIVREYVLGLRMEVKRKELKDDATRQQELA
AYFTNCKLQKVHMRLVLTSAMGLCFKGGNYATAANFARMLLEKSPNEAQAKKARQVVQAC
GERKDGCQLNYDFRNPFVVCGATFVPIYRGQKDVSCPYCGSRFVPSVQGELCTICELSVV
GADASGLLCSPTQSR
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaagagcaaccgggtgaaggggctcgccttccacccgcgg
cgcccatggatcctcgccagcctccacagcggcgtcatccagatgtgggactaccgcatg
ggtaccctcctcgaccgcttcgacgagcacgacgggcccgtccgcggcgtccacttccac
gcaacgcagccgctcttcgtctccggaggtgatgactacaagattaaggtgtggaactac
aagactcaccgctgcctcttcacactccatggccacctcgactacattcgcaccgtgcag
ttccatgacgagtatccgtggatcgtcagtgccagtgacgaccagacaatccgtatctgg
aactggcagtcacgcacctgtgtcgccgtgctgacagggcataatcactatgtcatgtgt
gcttccttccatcccaaggaggaccttgtcgtgtcagcgtctctggatcagactgttcgg
gtatgggatattggggcactaaagaagaaatcagtctcgccagcagatgacattatgcgt
ctcactcagatgaacactgacctctttggaggcgtcgatgcggtggtcaagtatgtcttg
gagggtcatgaccgcggggtcaactgggcctcatttcatcccaccttaccacttattgtt
tctggggctgatgaccgtcaagtcaagctgtggagaatgaacgacaccaaggcatgggag
gttgatactttgagaggccacatgaacaatgtgtcttgcgtaatgttccacgcgaagcag
gacatcatcgtatccaactcagaagacaaaagcattcgcatttgggatgccacaaagaga
actgccatccagacattcaggcgtgagcatgaccgcttctggattcttgccgctcaccct
gagatgaatcttcttgcagctggtcatgacagtggcatgattgtgtttaagttggagagg
gagcgcccagctttcagcgtcagtggtgatacagtgttctatgtgaaggaccgattcctc
cggtactatgaatactccacacagaaggaggtccaggttgctcccattagaaggcctgga
acagtcagcttgaatcagtcaccaacaacattatcatacagtccaactgagaatgcaatc
ttgatctgctccgatgtggatgggggctcatatgagctatacatcgttcccaaggactct
gctggcaggtctgattatttgcaggaggcaaggaagggagctggtggttctgcagttttc
atagcccgcaatcgatttgcagtgctggagaagagcagcaacaatgttttggttaagaac
cttaaaaatgagattgtgaagaaaacccctcttcctcttgcaacagatgcaatttattat
gctgggacaggcaacatattgtgcaaagctgaagacagggtggcgatctttgatctgcag
cagaggcttgttcttggcgaactccaagcacctactgtcaagtatgtagtttggtccagt
gatatggagtctattgcactgcttagcaagcacgccatagtcattgcaaacaagaagctg
gtccatcgctgcacgcttcatgaaaccatacgtgtaaagagtggtgcatgggatgaaaat
ggtgtattcatatacaccactttgaaccatatcaagtattgccttcctaatggagacagt
ggcatcatcagaacactttatgtcccaatttacattaccagagttatcgggaacagcatc
ttctgcttagatcgtgatggaaagaacaagttgataacagtcgatgcttctgaatacatt
ttcaagctcgcccttttccggaaacgctatgaccatgtcatgagtatgattaagaactcg
cagctgtgtgggcaggctgtgatttcttatttacaacagaaggggtttccagaagttgct
ctccactttgtgaaagatgagaagaccagatttaatctggctcttgagagtggaaacatc
cagattgctgttgcttctgcgaaggaacttgatgacaaggatcactggtacaggttggga
attgaggctttgaggcagggaaacgttggtatcgttgaatatgcataccagcggacaaag
aatttcgacaggcttgcttttctctatcttataactggttacttggacaaggtgggcttt
atgtgtaagattgctgggcagaataacaatttgatgggccagttccataatgcactgtat
ctcggggatgtacggaagcgagttgagatcttggagaatgcagggcagctacctcttgca
tatgtaactgctgccactcatggcctcattgaaattgctgagaggcttgttgctgagttg
ggggagaatgccccttctctacctgaagggaaagctagctcactgctgattcctcctgct
cctcttacatcttgtggcgactggcctttattgaaggtgatgcgtggtatctttgatgct
ggactagatgctactgggagggcagatcaggatgaatactgtgaagatgctggtggtgac
tggggtgatgaagaactagacattgttgacgtaaataatgtgatggaaaatggagatatt
gttgaccacaatgaggaagatgaggcaaacgaagaggaaggtggctgggaccttgaagat
ctggaattgccacctgagacagagacgccaaaggctgctggtccggcccgttcctctttg
tttgtggctcccactccaggcatgcctgtcagccaaatttggacgcagaagtcatccctc
gctggggagcatgctgcagctggcaactttgacactgcaatgcgattgcttagccgccag
ttgggtgtcaagaattttactcctctgaagcctttgtttcttgatgcacacatgggcagt
catacctttttgcgtgcatttgcaagtgctccggttgtatctgtagctattgagaaaggc
tggactgaatctgctagtcctaatgtgaggggcccacctgcacttgtctttaccttctcg
caaatggatggcaagcttaaggctgcatataaagccacaaccgagggtaaattccctgaa
gcactgaggcagttcctgaacatcctacacatcatcccgctccttattgtggactcgcga
agagaagttgatgaagtaaaggagctgattgagattgtgagagagtatgtccttggtctt
aggatggaagtcaaaaggaaggagctgaaagatgacgccacccggcaacaggagttggct
gcgtacttcactaactgcaagctgcagaaggttcacatgcgccttgtcctcactagcgct
atgggcctttgcttcaagggcggaaactatgctactgcagcaaattttgcccggatgctt
ctggagaagagccccaatgaggcccaagcgaagaaggctaggcaagttgtgcaggcctgt
ggggaaaggaaggatggctgtcagttgaactatgacttcaggaatccgtttgtggtgtgt
ggagcaacctttgttccgatataccgggggcagaaggatgtttcctgcccgtactgtgga
tctcggttcgtgccctcggttcaaggtgagctgtgtaccatatgcgagctctcggttgtt
ggggcagatgcttctggcctgctctgctcgcctacacaatcgagataa

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