Phragmites australis (common reed): 133911363
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Entry
133911363 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133911363 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133911363
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133911363
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133911363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Rtf2
zf-rbx1
zf-C3HC4_3
zf-UDP
zf-RING_5
Beta-prop_WDR3_2nd
zf-RING_16
zf-ANAPC11
zf-Nse
zf_RING_Vps8
DUF5817
zf-RING_4
WDR55
RINGv
PknG_rubred
zf-RING_11
zf-Vps39_C
BKRF4
Motif
Other DBs
NCBI-GeneID:
133911363
NCBI-ProteinID:
XP_062209560
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Position
3:669815..674781
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AA seq
595 aa
AA seq
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MAMASLSPAPPSRSQARRWMPPALEDFFEEDDVEVDYGEEDQEDDQGSEGEGSEEQEEGE
DGEGSDGDDEEEEEGEGGDSAREGSMMSGRARISGVAGATGGAAERVSMPTCPVCMEAWT
SDGPHRISCIPCGHVYGRSCLERWLTQRGNRSSTCPQCGKRFKHKDIINLYAPEVAIPNN
ELEKEILYLREKTDSLEKMIIHHGKLLEGITKKQIGTEQTIIDAGRSKRRRLAEHSDGAA
HLEPSTSVTVNFSLQNELFLDGARVISIDASNQIILASGRATGVDVEHVLTKISMLSTHE
ACKIQLPPDTKAVRDMCILPGGSAIFTSLGRRLSLFSMTTNSVVLQCDLPAPGWSCSADV
SSSRHVYAGLQNGMLLVFDIRQTARPLHSMVGLSAHPVHTLHSVIDNNGSRKVLSASAVG
PCMWDADENQSRPHSLTGMEIQRVCISLACAPPSSDLLVASFRPKVDASEYATTSQVYLS
QTPTRSGSGKLGHHTLLRRTGNMSVAEGTTCYANVSEVRMSKSAIIPYGDNQRLFAYGDE
SLRGVRTWQLPSFAIHADLCSHQQPILDLRYAESSGGGRYLGCLSEEKLQVFRIR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcatccctctcgcctgcgccgccgtcgcgctcccaagccaggcggtggatg
ccgccggcgctggaggattttttcgaagaggatgatgttgaggtcgactacggcgaagaa
gaccaggaggatgaccaagggtccgagggggaaggatcggaggagcaggaggaaggagag
gacggggaaggatcagacggcgacgacgaagaggaagaagagggggaggggggagacagt
gctcgggagggtagcatgatgtccggccgagctaggatttccggggtggcgggggctacc
ggcggcgcggcagagagggtgagcatgcccacctgccccgtatgtatggaggcatggacc
tccgacggcccgcatcgcatcagttgtattccctgtgggcatgtctacgggagatcttgc
ctagagagatggttaacccagcgtgggaatcgaagttcgacgtgccctcagtgtggcaaa
aggtttaaacataaggacatcatcaacctctatgcaccagaggttgccattccaaataat
gagcttgaaaaggaaattttgtatttaagagagaaaactgattcccttgagaaaatgatt
atccaccatgggaaattgcttgagggtattactaagaagcagattggtacggagcagaca
ataatagatgctggtagatcaaagagacggagattggcagagcactcggatggagcagca
catctggagccatctacctcagtcacagtaaattttagcttacagaatgaattatttttg
gatggagctcgagtcatcagcatagatgcatctaaccaaataatacttgcttctggaagg
gcaactggtgtagatgttgaacatgttcttactaagattagcatgctttccacccatgaa
gcatgtaaaattcaacttcctcccgatactaaagctgttagggatatgtgtatcctgcct
ggtggctctgctatttttacgtcactaggcaggaggctatcacttttcagcatgacaact
aacagtgtcgttcttcaatgtgatttaccggcccctggttggtcgtgttcagcagatgta
tctagttcacgtcatgtttatgctggattgcagaacggcatgcttttggtctttgatatc
cgtcaaactgcaagacccttgcattctatggtggggctatccgcacatccagttcataca
ctccactccgtcattgataacaacggttccaggaaggttctttctgcttctgctgtaggt
ccctgcatgtgggatgctgatgaaaatcaaagcaggccacattcactaactgggatggaa
attcaacgtgtatgcatttctcttgcatgtgcccctccgtcaagcgatcttttggtggct
tccttccggcccaaagttgatgcatccgaatatgccaccacatctcaggtgtatctatca
caaacacctacgcgctctggctcaggaaaattagggcatcatacccttctgaggaggacg
ggtaacatgtccgttgctgaaggcacgacatgctatgccaacgtaagcgaagtacgcatg
tcgaaatccgcaatcataccttatggagacaatcaacgtctcttcgcctacggagacgag
tcgctgcgtggggtccggacttggcaactaccttcgtttgcgatccatgctgatctctgc
tcccaccagcaacccatccttgatttaaggtatgctgaaagttcaggtggagggaggtat
cttgggtgcttaagcgaggaaaagttgcaggtcttcagaattaggtag
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