KEGG   Phragmites australis (common reed): 133911433
Entry
133911433         CDS       T10575                                 
Name
(RefSeq) THO complex subunit 7B-like
  KO
K13176  THO complex subunit 7
Organism
paua  Phragmites australis (common reed)
Pathway
paua03013  Nucleocytoplasmic transport
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133911433
  09122 Translation
   03013 Nucleocytoplasmic transport
    133911433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133911433
   03041 Spliceosome [BR:paua03041]
    133911433
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     133911433
Spliceosome [BR:paua03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133911433
SSDB
Motif
Pfam: THOC7 YwqH-like APG6_N RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 133911433
NCBI-ProteinID: XP_062209658
LinkDB
Position
3:complement(1250931..1252350)
AA seq 242 aa
MLTKGRKVAGRGEEMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
IEKDADNISDCERLYKAFLQEINTFELPLLKSKAVVDANIREKESFNELQVEIQRQIVQA
QTDIEGLKRQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIADLEAENVA
CIRTLELRKKQFALLLHVVEELQISIEDEQKSIADELRAVAEEQNMSIEEGSGGASDSMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcttaccaaagggaggaaagttgctggaaggggtgaagaaatgtctgcacattatgca
tttggaccgcaggaggatgatgcgattattaaacacaggcttctgactaggacgacaact
accaggggtgaaccgccgctaaagaagcttcagaagaagttcatgtcctttgccactgag
attgagaaggatgcagataacataagtgactgtgagagactgtacaaggccttcctacag
gaaattaacacctttgagttgcctcttctgaaaagcaaggctgttgttgatgcaaacatt
agggagaaggagagcttcaatgagctgcaagttgagatccagcgacagatcgtgcaagct
cagactgatattgagggtcttaagaggcaacttgagcagagcaagatcgagaggcagcac
aaagaggagtgtgaagcaatccgaaagatgatttctttgcagcctccacggtcagaaaca
gagaaacttattgcagatcttgagaaggagattgctgacttggaggctgagaatgtagca
tgcataaggactttggaactaaggaagaagcagtttgcgcttcttctgcatgtggttgag
gaattgcagatttcgattgaagatgagcagaagagtatagcagatgagttgagagctgtc
gctgaagagcagaatatgagcatagaggaaggcagcggcggtgcttcagattccatggcc
gtagactga

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