Phragmites australis (common reed): 133911433
Help
Entry
133911433 CDS
T10575
Name
(RefSeq) THO complex subunit 7B-like
KO
K13176
THO complex subunit 7
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133911433
09122 Translation
03013 Nucleocytoplasmic transport
133911433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133911433
03041 Spliceosome [BR:
paua03041
]
133911433
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133911433
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133911433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
YwqH-like
APG6_N
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-GeneID:
133911433
NCBI-ProteinID:
XP_062209658
LinkDB
All DBs
Position
3:complement(1250931..1252350)
Genome browser
AA seq
242 aa
AA seq
DB search
MLTKGRKVAGRGEEMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
IEKDADNISDCERLYKAFLQEINTFELPLLKSKAVVDANIREKESFNELQVEIQRQIVQA
QTDIEGLKRQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIADLEAENVA
CIRTLELRKKQFALLLHVVEELQISIEDEQKSIADELRAVAEEQNMSIEEGSGGASDSMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaaagggaggaaagttgctggaaggggtgaagaaatgtctgcacattatgca
tttggaccgcaggaggatgatgcgattattaaacacaggcttctgactaggacgacaact
accaggggtgaaccgccgctaaagaagcttcagaagaagttcatgtcctttgccactgag
attgagaaggatgcagataacataagtgactgtgagagactgtacaaggccttcctacag
gaaattaacacctttgagttgcctcttctgaaaagcaaggctgttgttgatgcaaacatt
agggagaaggagagcttcaatgagctgcaagttgagatccagcgacagatcgtgcaagct
cagactgatattgagggtcttaagaggcaacttgagcagagcaagatcgagaggcagcac
aaagaggagtgtgaagcaatccgaaagatgatttctttgcagcctccacggtcagaaaca
gagaaacttattgcagatcttgagaaggagattgctgacttggaggctgagaatgtagca
tgcataaggactttggaactaaggaagaagcagtttgcgcttcttctgcatgtggttgag
gaattgcagatttcgattgaagatgagcagaagagtatagcagatgagttgagagctgtc
gctgaagagcagaatatgagcatagaggaaggcagcggcggtgcttcagattccatggcc
gtagactga
DBGET
integrated database retrieval system