Phragmites australis (common reed): 133911454
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Entry
133911454 CDS
T10575
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133911454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133911454
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
133911454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_Vps41
Tricorn_2nd
Peptidase_M10_C
Beta-prop_DCAF4
KNTC1_N
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_SCAP
Beta-prop_VPS8
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
133911454
NCBI-ProteinID:
XP_062209682
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All DBs
Position
3:1534790..1538928
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AA seq
521 aa
AA seq
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MDHHHHHLTPPPSPMENSSAAGASSKPPTPASTLNSRLASAPSSRPSATQSHPSTPASAP
SPASRTVYSDRFIPSRTGSNLALFDLAPSPSSLDAAASGPVTSSGSAPAISPYCALLRAA
LFGPDTPDRVASSATACSSSSSAGASSVGTPATGNIFRFKAEVPRKAKRALFSGGDEEDA
LFPGVFTTRGAGPRKIPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNAC
SSKVTKLCDLGVDDNVCSVGWAQRGTHLAVGTNQGKVQIWDAARCKRIRTMESHRMRVGA
LAWNSSLLSSGSRDKSILHHDIRAQEDYVSKLTGHKSEVCGLKWSYDNHQLASGGNDNRL
FVWNSHSVQPVLKYTEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCMD
TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLVTLTGHAYRVLYLAISPDGQT
IVTGAGDETLRFWNVFPSPKSQSSDSLSCVGGTSFVRSYIR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccaccaccaccacctgaccccgccgccgtcgccgatggagaactcctcggcg
gcgggggcgtcctccaagccacccaccccagcatccacgctcaactcgcgcctcgcctcc
gcgccctcatcccgcccatccgccacgcagtcgcacccttccacgcccgcatctgcgccc
tcgccggcctcccgcaccgtctacagcgacagattcatccccagccgcaccggatccaac
ctcgcgctcttcgacctcgcgccctcgccctcctccctcgacgccgccgccagcggcccg
gtcacgtcctccggatctgcgccagccatttcgccgtactgcgcgctcctccgcgccgcg
ctcttcgggcccgacacgccggaccgggtggcgtcctcggccaccgcgtgctcatcctcc
tcgtcggcgggggcgtcgtcggtggggacccccgcgaccgggaacatattcagatttaag
gcggaggtaccccggaaagcgaagagggcgctcttctccggcggggacgaggaggatgcg
ctgttccccggggtgttcacgacgaggggcgccgggccaaggaagatcccaaggtcgcct
tacaaggtgctggatgcgccagcgttgcaggacgacttctacttgaaccttgtggattgg
tcgtcacataatgtccttgccgttggattgggcaattgcgtctatttgtggaatgcatgc
agcagcaaggtcaccaagctatgcgacttgggggtggacgacaatgtttgttctgttggg
tgggctcagcgtggcactcacctagctgtagggacaaatcaaggcaaagttcagatatgg
gatgcagctcgctgtaaaagaataagaacgatggaaagccatcgcatgcgtgtaggtgct
cttgcatggaattcttcattgctttcttctggcagtcgtgacaagagcattcttcaccat
gatatccgcgctcaagaagattatgttagcaaacttactgggcataaatctgaggtatgt
gggctcaagtggtcttacgataaccatcaactcgcatctggtggaaatgataacagactt
tttgtttggaattcgcattcagtacaaccagtattaaagtatactgagcacacagcagct
gtcaaagctattgcttggtcacctcatctgcatgggcttcttgcatctggtggaggaact
gcagatagatgcatacgattttggaatacgaccacaaatacacacttgagctgcatggac
acaggaagtcaggtctgcaatcttgtgtggtcaaagaatgtaaatgagcttgtaagcacc
cacggatactcccagaaccaaataattgtttggagatatccaacaatgtcgaagcttgtc
actttgacaggacatgcatacagagtattgtatttagctatttcccctgatggacagact
atagttacgggcgctggtgacgaaacactccggttttggaacgtgttcccatctccgaag
tcccagagttctgacagtttaagttgcgtcggaggaacatcatttgttaggagctacatc
cggtga
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